Job Description P38104 Confidence 40.74% Date Thu Jan 5 11:57:58 GMT 2012 Rank 405 Aligned Residues 145 % Identity 13% Template c3eb2A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution Resolution 2.04 Å

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	D	E	A	L	D	D	Y	A	R	H	Q	E	L	G	F	K	A	I	R	V	Q	C	G	I	P	G	M	K	T	T	Y	G	M	S	K	G	K	G	L	A	Y	E	P	A	T	K	G	Q	W	P	E	E	Q	L	W	S	T	E	K	Y	L	D	F	M	P	K	L	F	D	A	V	R	N	K	F	G	F	N
Query Conservation
Alig confidence																								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	D	V	M	G	R	L	C	D	D	L	I	Q	A	G	V	H	G	L	T	P	.	L	G	S	T	G	E	F	A	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	A	Q	R	E	A	V	V	R	A	T	I	E	A	A	Q	R	R
Template Known Secondary structure																T	T		S		B	B	T	.	T	S	G	G	G	T	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T	S
Template Predicted Secondary structure																								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.																													.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.								.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.							.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.																	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.																	.	.	.	.	.	.
Query Sequence		E	H	L	L	H	D	M	H	H	R	L	T	P	I	E	A	A	R	F	G	K	S	I	E	D	Y	R	M	F	W	M	E	D	P	T	P	A	E	N	.	.	.	.	.	.	.	Q	E	C	F	R	L	I	R	Q	H	T	V	T	P	I	A	.	.	.	.	.	.	V	G	E	V	F	N	S	I	W	D	C	K
Query Conservation																																									.	.	.	.	.	.	.																	.	.	.	.	.	.
Alig confidence										.																															.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation										.
Template Sequence		V	P	V	V	A	G	V	A	.	S	T	S	V	A	D	A	V	A	Q	A	K	L	Y	E	K	L	G	A	D	G	I	L	A	I	L	E	A	Y	F	P	L	K	D	A	Q	I	E	S	Y	F	R	A	I	A	D	A	V	E	I	P	V	V	I	Y	T	N	P	Q	F	Q	R	S	D	L	T	L	D	V	I	A
Template Known Secondary structure		S		B						.		S	S															T		S									S	S																			S	S								T	T	T		S	S
Template Predicted Secondary structure										.
Template SS confidence
		74	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	I	E	E	Q	L	I	D	Y	I	R	T	T	L	T	H	A	G	G	I	T	G	M	R	R	I	A	D	F	A
Query Conservation
Alig confidence						.	.											.
Template Conservation						.	.											.
Template Sequence		R	L	A	E	.	.	H	P	R	I	R	Y	I	K	D	A	.	S	T	N	T	G	R	L	L	S	I	I	N	R	C
Template Known Secondary structure					T	.	.	S	T	T								.	S	S
Template Predicted Secondary structure						.	.											.
Template SS confidence
		153	.	.	.			.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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