Job Description P38104 Confidence 49.35% Date Thu Jan 5 11:57:58 GMT 2012 Rank 370 Aligned Residues 156 % Identity 16% Template c3d0cB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 oceanobacillus iheyensis at 1.9 a resolution Resolution 1.90 Å

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	D	E	A	L	D	D	Y	A	R	H	Q	E	L	G	F	K	A	I	R	V	Q	C	G	I	P	G	M	K	T	T	Y	G	M	S	K	G	K	G	L	A	Y	E	P	A	T	K	G	Q	W	P	E	E	Q	L	W	S	T	E	K	Y	L	D	F	M	P	K	L	F	D	A	V	R	N	K	F	G	F	N
Query Conservation
Alig confidence																								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	W	K	G	L	D	D	N	V	E	F	L	L	Q	N	G	I	E	V	I	V	P	.	N	G	N	T	G	E	F	Y	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	E	E	A	K	Q	V	A	T	R	V	T	E	L	V	N	G	R
Template Known Secondary structure																T	T						T	.	T	S	G	G	G	T	G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T	S
Template Predicted Secondary structure																								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60																													.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.								240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.																								.	.
Query SS confidence																																			.	.	.	.	.	.	.																								.	.
Query Sequence		E	H	L	L	H	D	M	H	H	R	L	T	P	I	E	A	A	R	F	G	K	S	I	E	D	Y	R	M	F	W	M	E	D	.	.	.	.	.	.	.	P	T	P	A	E	N	Q	E	C	F	R	L	I	R	Q	H	T	V	T	P	I	A	V	.	.	G	E	V	F	N	S	I	W	D	C	K	Q	L	I	E
Query Conservation																																			.	.	.	.	.	.	.																								.	.
Alig confidence									.			.																							.	.	.	.	.	.	.																								.	.														.	.
Template Conservation									.			.																																																																				.	.
Template Sequence		A	T	V	V	A	G	I	.	G	Y	.	S	V	D	T	A	I	E	L	G	K	S	A	I	D	S	G	A	D	C	V	X	I	H	Q	P	V	H	P	Y	I	T	D	A	G	A	V	E	Y	Y	R	N	I	I	E	A	L	D	A	P	S	I	I	Y	F	K	D	A	H	L	S	D	D	V	I	K	E	L	.	.
Template Known Secondary structure		S							.		S	.	S														T	T		S										S																		S	S	S									T	T	S		T							.	.
Template Predicted Secondary structure									.			.																																																																				.	.
Template SS confidence
		80	.	.	.	.	.	.		.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	L	I	D	Y	I	R	T	T	L	T	H	A	G	G	I	T	G	M	R	R	I	A	D	F	A	S	L	Y	Q	V	R	T	G	S	H	G	P
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		A	P	L	D	K	L	V	G	I	K	Y	A	I	.	N	D	I	Q	R	V	T	Q	V	X	R	A	V	P	K	S	S	N	V	A	F	I	C	G	T
Template Known Secondary structure		T	T		T	T									.													S		G	G	G							T	T
Template Predicted Secondary structure															.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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