Job Description P38104 Confidence 100.00% Date Thu Jan 5 11:57:58 GMT 2012 Rank 86 Aligned Residues 325 % Identity 14% Template c2pgeA_ PDB info PDB header:lyase Chain: A: PDB Molecule:menc; PDBTitle: crystal structure of menc from desulfotalea psychrophila2 lsv54 Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.					.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																.	.	.	.																									.	.	.	.
Query SS confidence																.	.	.	.																									.	.	.	.
Query Sequence		M	K	I	V	K	A	E	V	F	V	T	C	P	G	.	.	.	.	R	N	F	V	T	L	K	I	T	T	E	D	G	I	T	G	L	G	D	A	T	L	N	G	.	.	.	.	R	E	L	S	V	A	S	Y	L	Q	D	H	L	C	P	Q	L	I	G	R	D	A	H	R	I	E	D	I	W	Q	F	F	Y	K
Query Conservation																.	.	.	.																									.	.	.	.
Alig confidence																.	.	.	.									.																.	.	.	.
Template Conservation																												.
Template Sequence		M	E	L	S	Y	R	R	S	D	L	I	F	K	R	V	L	T	S	K	P	T	W	F	V	R	L	.	D	I	D	G	H	G	G	Q	G	E	V	S	L	I	P	G	L	S	L	D	P	E	E	Q	I	G	R	E	L	D	L	L	A	R	R	L	R	A	E	E	P	I	R	L	R	Q	F	L	A	E	R	G	G
Template Known Secondary structure													B															.			T	T											T	T	T		S	S																			S												T	S	S
Template Predicted Secondary structure																												.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		73	.	.	.	.	.	.	80																			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	Y	W	R	R	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	M	S	A	I	S	A	V	D	M	A	L	W	D	I	K	A	K	A	A	N	M	P	L	Y	Q	L	L	G	G	A	S	R	E	G	V	M	V	Y	C	H	T	T	G	H	S	I	D	E	A	L	D	D
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation																																																												.
Template Sequence		A	D	F	S	D	Y	R	S	V	L	T	D	I	A	G	I	L	D	S	W	Q	V	S	T	D	G	R	F	P	A	L	R	F	A	L	E	M	A	L	L	D	L	L	S	G	G	R	Q	E	W	F	A	S	D	F	T	R	G	.	E	K	R	I	P	V	N	G	L	I	W	M	G	E	A	A	F	M	Q	E	Q
Template Known Secondary structure			T	T	S																T	T	S	S	T	T	S	S																		T	S	S	S		S	S		S	T	T	T	T	T	.	S					B
Template Predicted Secondary structure																																																												.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		Y	A	R	H	Q	E	L	G	F	K	A	I	R	V	Q	C	G	I	P	G	M	K	T	T	Y	G	M	S	K	G	K	G	L	A	Y	E	P	A	T	K	G	Q	W	P	E	E	Q	L	W	S	T	E	K	Y	L	D	F	M	P	K	L	F	D	A	V	R	N	K	F	G	.	F	N	E	H	L	L	H	D	M
Query Conservation																																																																								.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	A	K	L	A	E	G	Y	G	C	L	K	L	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	D	K	E	C	A	L	L	A	G	I	R	E	S	F	S	P	Q	Q	L	E	I	R	V	D	A
Template Known Secondary structure								T	T		S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																S		T	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																																						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.			.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		H	H	R	L	T	P	I	E	A	A	R	F	G	K	S	I	E	D	Y	R	M	F	W	M	E	D	P	T	P	A	E	N	Q	E	C	F	R	L	I	R	Q	H	T	V	T	P	I	A	V	G	E	V	F	N	S	I	W	D	C	K	Q	L	.	.	I	E	E	Q	L	I	D	Y	I	R	T	T	L	T	H	A
Query Conservation																																																																.	.
Alig confidence																																																																.	.
Template Conservation
Template Sequence		N	G	A	F	S	P	A	N	A	P	Q	R	L	K	R	L	S	Q	F	H	L	H	S	I	E	Q	P	I	R	Q	H	Q	W	S	E	M	A	A	L	C	A	N	S	P	L	A	I	A	L	D	E	E	L	I	G	L	G	A	E	Q	R	S	A	M	L	D	A	I	R	P	Q	Y	I	I	L	K	P	S	L	L
Template Known Secondary structure		T	T	B	B		T	T	T										T	T			S						B		S	S													S	S					S	G	G	G	T	T			T													S
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	I	T	G	M	R	R	I	A	D	F	A	S	L	Y	Q	V	R	T	G	S	H	G	P	S	D	L	S	P	V	C	M	A	A	A	L	H	F	D	L	W	V	P	N	F	G	V	Q	E	Y	M	G	Y	S	E	Q	M	L	E	V	F	P	H	N	W	T	F	D	N	G	Y	M	H	P
Query Conservation
Alig confidence																								.																																								.
Template Conservation																								.																																								.
Template Sequence		G	G	F	H	Y	A	G	Q	W	I	E	L	A	R	E	R	G	I	G	F	W	I	.	T	S	A	L	E	S	N	L	G	L	A	A	I	A	Q	W	T	A	L	Y	Q	P	T	M	P	Q	G	L	G	T	G	Q	L	Y	T	N	N	L	P	.	S	N	L	A	V	D	G	G	L	L	G	V
Template Known Secondary structure		T	S														T	T						.	B			S															T	T			S	S		B	B		S					B	S	S				.							S	S
Template Predicted Secondary structure																								.																																								.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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