Job Description P38104 Confidence 100.00% Date Thu Jan 5 11:57:58 GMT 2012 Rank 108 Aligned Residues 320 % Identity 18% Template c2pa6A_ PDB info PDB header:lyase Chain: A: PDB Molecule:enolase; PDBTitle: crystal structure of mj0232 from methanococcus jannaschii Resolution 1.85 Å

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		1	.	.	.	.	.	.	.			.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	I	V	K	A	E	V	.	.	F	V	T	C	P	G	R	N	F	V	T	L	K	I	T	T	E	D	G	I	T	G	L	G	D	A	T	L	N	G	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	V	A	S	Y	L	Q	D	H	L	C	P	Q	L	I	G	R
Query Conservation										.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	E	I	K	D	I	V	A	R	E	V	I	D	S	R	G	N	P	T	V	E	V	E	V	I	T	K	G	N	G	Y	G	S	A	I	V	P	S	G	A	S	T	G	T	H	E	A	L	E	L	R	D	K	E	K	R	F	G	G	K	G	V	L	M	A	V	E	N	V	N	S	I	I	R	P	E	I	L	G	Y
Template Known Secondary structure		G	B												T	T	S											T	T													S	S		S	S	S								S	S	G	G	G	G	T												T						T	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																				.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	H	R	I	E	D	I	W	Q	F	F	Y	K	G	A	Y	W	.	R	R	G	P	V	T	M	S	A	I	S	A	V	D	M	A	L	W	D	I	K	A	K	A	A	N	M	P	L	Y	Q	L	L	G	G	A	S	R	E	G	V	M	V	Y	C	H	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																				.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	R	M	Q	R	E	I	D	T	I	M	I	E	L	D	G	T	P	N	K	S	R	L	G	A	N	A	I	L	A	V	S	L	A	V	A	K	A	A	A	A	T	A	K	I	P	L	Y	K	Y	L	G	G	F	N	S	Y	V	M	P	V	P	M	M	N	V	I	N	G	G	K	H	A	G	N	D	L	D	L
Template Known Secondary structure		B	T	T															S	T	T		T	T	T																					T										S																S	T	T	T	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
							125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	G	H	S	I	D	E	A	L	D	D	Y	A	R	H	Q	E	L	G	F	K	A	I	R	V	Q	C	G	I	P	G	M	K	T	T	Y	G	M	S	K	G	K	G	L	A	Y	E	P	A	T	K	G	Q	W	P	E	E	Q	L	W	S	T	E	K	Y	L	D	F	M	P	K	L	F	D	A	V
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	E	F	M	I	M	P	V	G	A	T	S	I	S	E	A	V	R	M	G	S	E	V	Y	H	V	L	K	N	V	I	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Y	G	K	N	A	V	N	V	G	D	E	G	G	F	A	P	P	L	K	T	S	R	E	A	L	D	L	L	T	E	S
Template Known Secondary structure		S							T	T		S	S																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S			B		T	T	S		B			S			S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		200	.	.	.	.			.	.	.	.	.	210	.	.	.															.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure							.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence							.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		R	N	K	F	G	.	.	F	N	E	H	L	L	H	D	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	H	R	L	T	P	I	E	A	A	R	F	G	K	S	I	.	E	D	Y	R	M	F	W	M	E	D	P	T	P	A	E	N	Q	E	C	F	R	L	I	R	Q	H	T	V	T	P	I	A	V
Query Conservation							.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence							.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		V	K	K	A	G	Y	E	D	E	V	V	F	A	L	D	A	A	A	S	E	F	Y	K	D	G	Y	Y	Y	V	E	G	K	K	L	T	R	E	E	L	L	D	Y	Y	K	A	L	V	D	E	Y	P	I	V	S	I	E	D	P	F	H	E	E	D	F	E	G	F	A	M	I	T	K	E	L	D	I	Q	I	V	G
Template Known Secondary structure						T		T	T	T									G	G	G	G			T	T					T	T																			S									S		T	T												S	S	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		263	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		G	E	.	V	F	N	S	I	W	D	C	K	Q	L	I	E	E	Q	L	I	D	Y	I	R	T	T	L	T	H	A	G	G	I	T	G	M	R	R	I	A	D	F	A	S	L	Y	Q	V	R	T	G	S	H	G	P	S	D	L	S	P	V	C	M	A	A	A	L	H	F	D	L	W	V	P
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		D	D	L	F	V	T	N	V	E	R	L	R	K	G	I	E	M	K	A	A	N	A	L	L	L	K	V	N	Q	I	G	T	L	S	E	A	V	D	A	A	Q	L	A	F	R	N	G	Y	G	V	V	V	S	H	R	S	G	E	T	E	D	T	T	I	A	D	L	S	V	A	L	N	S	G
Template Known Secondary structure		S	T	T	T	T	T												T			S											S													T	T	T									S	S			S											T	T		S
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions