Job Description P38104 Confidence 35.24% Date Thu Jan 5 11:57:58 GMT 2012 Rank 425 Aligned Residues 109 % Identity 11% Template c2p3eA_ PDB info PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of aq1208 from aquifex aeolicus Resolution 1.99 Å

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		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.
Predicted Secondary structure																									.	.																																																.	.
Query SS confidence																									.	.																																																.	.
Query Sequence		Y	L	D	F	M	P	K	L	F	D	A	V	R	N	K	F	G	F	N	E	H	L	L	.	.	H	D	M	H	H	R	L	T	P	I	E	A	A	R	F	G	K	S	I	E	D	Y	R	M	F	W	M	E	D	P	T	P	A	E	N	Q	E	C	F	R	L	I	R	Q	H	T	V	.	.	T	P	I	A	V	G
Query Conservation																									.	.																																																.	.
Alig confidence																			.						.	.						.	.	.	.	.	.														.				.	.	.	.																.	.
Template Conservation																			.													.	.	.	.	.	.														.				.	.	.	.
Template Sequence		S	S	N	F	I	K	E	R	F	E	A	Y	R	K	A	F	P	.	D	A	L	I	C	Y	A	V	K	A	N	F	.	.	.	.	.	.	N	P	H	L	V	K	L	L	G	E	L	G	A	.	G	A	D	.	.	.	.	I	V	S	G	G	E	L	Y	L	A	K	K	A	G	I	P	P	E	R	I	V	Y	A
Template Known Secondary structure																	S	T	.	T	S						G	G	G			.	.	.	.	.	.											T	T		.				.	.	.	.		S	S										T	T			G	G	G
Template Predicted Secondary structure																			.													.	.	.	.	.	.														.				.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.							.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	F	N	S	I	W	D	C	K	Q	L	I	E	E	Q	L	I	D	Y	I	R	T	T	L	T	H	A	G	G	I	T	G	M	R	R	I	A	D	F	A	S	L	Y	Q	V	R	T	G	S	H
Query Conservation
Alig confidence																		.								.	.	.	.	.
Template Conservation																		.								.	.	.	.	.
Template Sequence		G	V	G	K	T	E	K	E	L	T	D	A	V	D	S	E	.	I	L	M	F	N	V	E	.	.	.	.	.	S	R	Q	E	L	D	V	L	N	E	I	A	G	K	L	G	K	K	A	R	I	A
Template Known Secondary structure		S	S													T	T	.		S						.	.	.	.	.																T
Template Predicted Secondary structure																		.								.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions