Job Description P38104 Confidence 100.00% Date Thu Jan 5 11:57:58 GMT 2012 Rank 63 Aligned Residues 347 % Identity 23% Template c2p0iA_ PDB info PDB header:lyase Chain: A: PDB Molecule:l-rhamnonate dehydratase; PDBTitle: crystal structure of l-rhamnonate dehydratase from gibberella zeae Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.																												.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	V	K	A	E	V	F	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	P	G	R	N	F	V	T	L	K	I	T	T	E	D	G	I	T	G	L	G	D	A	T	L	N	G	R	E	L	S	V	A	S	Y	L	Q	D	H	L	C	P	Q
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation																																																																.	.	.
Template Sequence		K	I	K	A	I	R	S	F	I	I	G	H	W	L	I	D	S	D	I	S	T	P	A	S	K	W	E	Q	Y	K	K	S	R	T	S	W	G	I	N	V	L	G	S	F	L	V	E	I	E	A	T	D	G	T	V	G	F	A	T	G	F	G	.	.	.	G	P	P	A	C	W	L	V	H	Q	H	F	E	R	F
Template Known Secondary structure															T	T	T	S					T	T	T	T	S	G	G	G	S	S						T	T	T	S	S										T	T	S										.	.	.											T	G	G	G	G
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		L	I	G	R	D	A	H	R	I	E	D	I	W	Q	F	F	Y	K	G	A	Y	W	.	R	R	G	P	V	T	M	S	A	I	S	A	V	D	M	A	L	W	D	I	K	A	K	A	A	N	M	P	L	Y	Q	L	L	G	G	A	S	R	E	G	V	M	V	Y	C	H	T	T	G	H	S	I	D	E	A	L	D
Query Conservation																								.
Alig confidence																								.																																																		.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		L	I	G	A	D	P	R	N	T	N	L	L	F	E	Q	X	Y	R	A	S	X	F	Y	G	R	K	G	L	P	I	A	V	I	S	V	I	D	L	A	L	W	D	L	L	G	K	V	R	N	E	P	V	Y	R	L	I	G	G	A	T	K	E	R	L	D	F	Y	C	T	G	P	E	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	T			T	T													T	T	T	T		S	S	S																						T	S	B	G	G	G	T	T	T			S		S								S	S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	A	R	H	Q	E	L	G	F	K	A	I	R	V	Q	C	G	I	P	G	M	K	T	T	Y	G	M	S	K	G	K	G	L	A	Y	E	P	A	T	K	G	Q	W	P	E	E	Q	L	W	S	T	E	K	Y	L	D	F	M	P	K	L	F	D	A	V	R	N	K	F	G	F	N	E	H	L	L	H	D	M
Query Conservation
Alig confidence		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	P	T	A	A	K	A	X	G	F	W	G	G	K	V	P	L	P	F	C	P	D	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	G	L	R	K	N	V	E	F	L	R	K	H	R	E	A	V	G	P	D	F	P	I	X	V	D	C
Template Known Secondary structure		.								T		S										G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				S	S	S
Template Predicted Secondary structure		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.																													.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		H	H	R	L	T	P	I	E	A	A	R	F	G	K	S	I	E	D	Y	R	M	F	W	M	E	D	P	T	P	A	E	N	Q	E	C	F	R	L	I	R	Q	H	T	.	V	T	P	I	A	V	G	E	V	F	N	S	I	W	D	C	K	Q	L	I	E	E	Q	L	I	D	Y	I	R	T	T	L	T	H	A	G
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence		Y	X	S	L	N	V	S	Y	T	I	E	L	V	K	A	C	L	D	L	N	I	N	W	W	E	E	C	L	S	P	D	D	T	D	G	F	A	L	I	K	R	A	H	P	T	V	K	F	T	T	G	E	H	E	Y	S	R	Y	G	F	R	K	L	V	E	G	R	N	L	D	I	I	Q	P	D	V	X	W	L	G
Template Known Secondary structure		T	T														T	G	G	G			S						S		T	T		T	T										T	T	S						T	T												T	T				S						T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.
Predicted Secondary structure																																															.																															.	.
Query SS confidence																																															.																															.	.
Query Sequence		G	I	T	G	M	R	R	I	A	D	F	A	S	L	Y	Q	V	R	T	G	S	H	G	P	S	D	L	S	P	V	C	M	A	A	A	L	H	F	D	L	W	V	P	N	F	.	G	V	Q	E	Y	M	G	Y	S	E	Q	M	L	E	V	F	P	H	N	W	T	F	D	N	G	Y	M	H	P	G	.	.	D	K
Query Conservation																																															.																															.	.
Alig confidence																												.																			.																															.	.
Template Conservation																												.
Template Sequence		G	L	T	E	L	L	K	V	A	A	L	A	A	A	Y	D	V	P	V	V	P	H	A	S	G	P	.	Y	S	Y	H	F	Q	I	S	Q	P	N	T	P	F	Q	E	Y	L	A	N	S	P	D	G	K	S	V	L	P	V	F	G	D	L	F	I	D	E	P	I	P	T	K	G	Y	L	T	T	A	D	L	D	K
Template Known Secondary structure																T	T			B						T		.										T	T										S	T	T	S	S	S				T	T	T	T	S	B	S						T	T	S				G	G	G	G		S
Template Predicted Secondary structure																												.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	L	G	I	E	F	D	E	K	L	A	A	K	Y	P	Y	E	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	F	G	L	T	I	N	P	A	A	R	A	K	L	I	P	S	D	Y
Template Known Secondary structure		S	B	T				B		T	T	T	T	S	S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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