Job Description P38104 Confidence 100.00% Date Thu Jan 5 11:57:58 GMT 2012 Rank 64 Aligned Residues 337 % Identity 26% Template c2ovlA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative racemase; PDBTitle: crystal structure of a racemase from streptomyces2 coelicolor a3(2) Resolution 2.13 Å

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		3	.	.	.	.	.	.	10	.	.																.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Query Sequence		I	V	K	A	E	V	F	V	T	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	R	N	F	V	T	L	K	I	T	T	E	D	G	I	T	G	L	G	D	A	T	L	N	G	R	E	.	L	S	V	A	S	Y	L	Q	D	H	L	C	P	Q	L	I	G	R	D	A	H	R	I	E	D	I
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation
Template Sequence		I	E	R	V	R	T	D	L	Y	R	I	P	L	P	T	R	L	T	D	S	T	H	G	A	X	X	D	F	E	L	I	T	V	R	I	E	D	S	D	G	A	T	G	L	G	Y	T	Y	T	V	N	H	G	G	A	A	V	A	T	X	V	D	K	D	L	R	G	C	L	L	G	A	D	A	E	Q	I	E	K	I
Template Known Secondary structure																			B		T	T	T																T	T	S											S	S	S											T	T					T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		67	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure												.																																																			.	.
Query SS confidence												.																																																			.	.
Query Sequence		W	Q	F	F	Y	K	G	A	Y	W	.	R	R	G	P	V	T	M	S	A	I	S	A	V	D	M	A	L	W	D	I	K	A	K	A	A	N	M	P	L	Y	Q	L	L	G	G	A	S	R	E	G	V	M	V	Y	C	H	T	T	G	H	.	.	S	I	D	E	A	L	D	D	Y	A	R	H	Q	E	L	G	F
Query Conservation												.																																																			.	.
Alig confidence												.																																					.														.	.
Template Conservation																																																	.
Template Sequence		W	Q	S	X	W	W	R	L	H	Y	A	G	R	G	G	H	A	T	S	A	I	S	A	V	D	I	A	L	W	D	L	K	G	I	R	A	R	T	P	L	W	K	L	F	G	G	Y	.	D	P	V	V	P	V	Y	A	G	G	I	D	L	E	L	P	V	A	D	L	K	T	Q	A	D	R	F	L	A	G	G	F
Template Known Secondary structure									T		T	T		S	S	T																					T	T	S	B					T	T			.		S										B	T	T	S															T	T
Template Predicted Secondary structure																																																	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	I	R	V	Q	C	G	I	P	G	M	K	T	T	Y	G	M	S	K	G	K	G	L	A	Y	E	P	A	T	K	G	Q	W	P	E	E	Q	L	W	S	T	E	K	Y	L	D	F	M	P	K	L	F	D	A	V	R	N	K	F	G	F	N	E	H	L	L	H	D	M	H	H	R	L	T	P	I	E	A	A
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	I	K	X	K	V	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	L	K	E	D	V	D	R	V	S	A	L	R	E	H	L	G	D	S	F	P	L	X	V	D	A	N	X	K	W	T	V	D	G	A	I
Template Known Secondary structure		S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S																	T	T	S							T	T		S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.																																			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	G	K	S	I	E	D	Y	R	M	F	W	M	E	D	P	T	P	A	E	N	Q	E	C	F	R	L	I	R	Q	H	T	V	T	P	I	A	V	G	E	V	F	N	S	I	W	D	C	K	Q	L	I	E	E	Q	L	I	D	Y	I	R	T	T	L	T	H	A	G	G	I	T	G	M	R	R	I	A	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	A	R	A	L	A	P	F	D	L	H	W	I	E	E	P	T	I	P	D	D	L	V	G	N	A	R	I	V	R	E	S	G	H	T	I	A	G	G	E	N	L	H	T	L	Y	D	F	H	N	A	V	R	A	G	S	L	T	L	P	E	P	D	V	S	N	I	G	G	Y	T	T	F	R	K	V	A	A	L
Template Known Secondary structure								G	G	G			S						S		T	T														S						T	T			S											T			S						T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	Y	Q	V	R	T	G	S	H	G	P	S	D	L	S	P	V	C	M	A	A	A	L	H	F	D	L	W	V	P	N	F	G	V	Q	E	Y	M	G	Y	S	E	Q	M	L	E	V	F	P	H	N	W	T	F	D	N	G	Y	M	H	P	G	D	K	P	G	L	G	I	E	F	D	E	K	L	A	A	K
Query Conservation
Alig confidence															.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.																						.	.	.	.	.
Template Sequence		A	E	A	N	N	X	L	L	T	S	H	G	V	.	.	.	.	.	.	.	H	D	L	T	V	H	A	L	A	S	V	P	H	R	T	Y	X	E	A	H	L	.	.	.	.	.	H	A	Y	X	A	E	P	X	A	V	T	D	G	C	V	S	A	P	D	R	P	G	H	G	V	V	L	D	F	E	R	L	G	R
Template Known Secondary structure					T	T							S		.	.	.	.	.	.	.									T	S		T	T									.	.	.	.	.	G	G	G	B	S	S					B	T	T							S	S	B	T				B							T
Template Predicted Secondary structure															.	.	.	.	.	.	.																						.	.	.	.	.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.								.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.						.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		384	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	V
Template Known Secondary structure		T	B
Template Predicted Secondary structure
Template SS confidence
		360	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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