Job Description P38104 Confidence 38.37% Date Thu Jan 5 11:57:58 GMT 2012 Rank 412 Aligned Residues 109 % Identity 12% Template c2o0tB_ PDB info PDB header:lyase Chain: B: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: the three dimensional structure of diaminopimelate decarboxylase from2 mycobacterium tuberculosis reveals a tetrameric enzyme organisation Resolution 2.33 Å

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		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.
Predicted Secondary structure																								.																																																			.	.
Query SS confidence																								.																																																			.	.
Query Sequence		Y	L	D	F	M	P	K	L	F	D	A	V	R	N	K	F	G	F	N	E	H	L	.	L	H	D	M	H	H	R	L	T	P	I	E	A	A	R	F	G	K	S	I	E	D	Y	R	M	F	W	M	E	D	P	T	P	A	E	N	Q	E	C	F	R	L	I	R	Q	H	T	V	T	P	.	.	I	A	V	G	E
Query Conservation																								.																																																			.	.
Alig confidence																								.							.	.	.	.	.	.														.				.	.	.	.																		.	.
Template Conservation																															.	.	.	.	.	.														.				.	.	.	.
Template Sequence		D	E	D	D	F	R	S	R	C	R	E	T	A	A	A	F	G	S	G	A	N	V	H	Y	A	A	A	F	L	.	.	.	.	.	.	C	S	E	V	A	R	W	I	S	E	E	G	L	.	C	L	D	.	.	.	.	V	C	T	G	G	E	L	A	V	A	L	H	A	S	F	P	P	E	R	I	T	L	H	G
Template Known Secondary structure																	T	T	S	G	G	G	B								.	.	.	.	.	.												T		.				.	.	.	.			S										T	T			G	G	G
Template Predicted Secondary structure																															.	.	.	.	.	.														.				.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.							.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	N	S	I	W	D	C	K	Q	L	I	E	E	Q	L	I	D	Y	I	R	T	T	L	T	H	A	G	G	I	T	G	M	R	R	I	A	D	F	A	S	L	Y	Q	V	R	T	G	S
Query Conservation
Alig confidence																	.								.	.	.	.	.
Template Conservation																	.								.	.	.	.	.
Template Sequence		N	N	K	S	V	S	E	L	T	A	A	V	K	A	G	.	V	G	H	I	V	V	D	.	.	.	.	.	S	M	T	E	I	E	R	L	D	A	I	A	G	E	A	G	I	V	Q	D	V
Template Known Secondary structure		S	S													T	.		S						.	.	.	.	.	S															T
Template Predicted Secondary structure																	.								.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions