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Job DescriptionP38104
Confidence100.00%DateThu Jan 5 11:57:58 GMT 2012
Rank37Aligned Residues355
% Identity23%Templatec2hxtA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:l-fuconate dehydratase; PDBTitle: crystal structure of l-fuconate dehydratase from xanthomonas2 campestris liganded with mg++ and d-erythronohydroxamate
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.. .......20.........30.........40.........50.........60....
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Query Sequence  IVKAEVFVTC. . . . . . . . . . . . . . . . . . PGRNFVTLKITTEDGITGLGDATLNGRELSVASYLQDHLCPQLIGRDAHRIE
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Template Sequence  IIALETHDVRFPTSRELDGSDAMNPDPDYSAAYVVLRTDGAEDLAGYGLVFTIGRGNDVQTAAVAALAEHVVGLSVDKVI
Template Known Secondary structure 

GGGTTTT

SS
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SS
TT

STTTTTT
B
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   65....70.. .......80.........90.........100.........110.........120.....
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Query Sequence  DIWQFFYK. . . . . . . . GAYWRRGPVTMSAISAVDMALWDIKAKAANMPLYQLLGGASREGVMVYCHTTG. . . . . . . . . . .
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Template Sequence  ADLGAFARRLTNDSQLRWLGPEKGVMHMAIGAVINAAWDLAARAANKPLWRFIAELTPEQLVDTIDFRYLSDALTRDEAL
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T
T
SSSTTSBTS



TT
TTT

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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   126...130.........140.........150.........160.........170..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HSIDEALDDYARHQELGFKAIRVQCGIPGMKTTYGMSKGKGLAYEPA
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Template Sequence  AILRDAQPQRAARTATLIEQGYPAYTTSPGWLGYSDEKLVRLAKEAVADGFRTIKLKVG. . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  GGG

TTS
TT
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   164.....170.........180.........190.........200.........210.........220..
 
   173......180.........190.........200.........210.........220.........230.........240.........250..
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Query Sequence  TKGQWPEEQLWSTEKYLDFMPKLFDAVRNKFGFNEHLLHDMHHRLTPIEAARFGKSIEDYRMFWMEDPTPAENQECFRLI
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Template Sequence  . . . . . . . . . . . . . . ANVQDDIRRCRLARAAIGPDIAMAVDANQRWDVGPAIDWMRQLAEFDIAWIEEPTSPDDVLGHAAI
Template Known Secondary structure  ..............S

SSS
TT


TTGGG

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S
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   223......230.........240.........250.........260.........270.........280........
 
   253.. ....260.........270.........280.........290.........300.........310.........320.........330.
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Query Sequence  RQH. TVTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTLTHAGGITGMRRIADFASLYQVRTGSHGPSDLSPVCMAAALHFD
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Template Sequence  RQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQIDAARVGGVNENLAILLLAAKFGVRVFPHAGGV. GLCELVQHLAMA
Template Known Secondary structure  TTS

TT

ST

S


TTTSSTT





ST.T
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   289290.........300.........310.........320.........330.........340.........350..... ....360.......
 
   332.......340.... .....350.........360.........370.........380.........390...
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Query Sequence  LWVPNFGVQEYMG. . YSEQMLEVFPHNWTFDNGYMHPGDKPGLGIEFDEKLAAKYPYEPAYLPV
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Template Sequence  DFVAITGKMEDRAIEFVDHLHQHFLDPVRIQHGRYLAPEVPGFSAEMHPASIAEFSYPDGRFWV
Template Known Secondary structure  TT


TT



SSGGGBSS


TT



SSB
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B
BTTTS
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   368.370.........380.........390.........400.........410.........420.........430.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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