 |
Job Description | P38104 | Confidence | 88.44% | Date | Thu Jan 5 11:57:58 GMT 2012 |
Rank | 234 | Aligned Residues | 110 |
% Identity | 12% | Template | c1zfjA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:inosine monophosphate dehydrogenase; |
PDBTitle: inosine monophosphate dehydrogenase (impdh; ec 1.1.1.205) from2 streptococcus pyogenes
|
Resolution | 1.90 Å |
|
 |
  |   |
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | |
|
|
|
. | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | |
. | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | |
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  | . | . | . | . |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
Query Sequence |   |
I | E | A | A | R | F | G | K | S | I | E | D | Y | R | M | F | W | M | . |
. |
. |
. |
E | D | P | T | P | A | E | N | Q | E | C | F | R | L | I | R | Q | H | T | . |
V | T | P | I | A | V | G | E | V | F | N | S | I | W | D | C | K | Q | L | I | E | E | Q | L | I | D | Y | I | R | T | T | L | T | H | . |
. |
. |
. |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
| . | . | . | . |
|
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   | . |   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |
|   |   |   | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
  |   |   |   |
|
|   |   |   |
|   |   |
|
|   |
|   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|
|   |
| . |   |
|   |
|   |
|   |
|   |   |
|   |   |
|
| . |
|
|   |
|   |
|
|   |
|   |
|   |   |   |
Template Sequence |   |
S | D | T | F | E | R | A | E | A | L | F | E | A | G | A | D | A | I | V | I | D | T | A | H | G | H | S | A | G | V | L | R | K | I | A | E | I | R | A | H | F | P | N | R | T | L | I | A | G | . |
N | I | A | T | A | E | G | A | R | A | L | Y | D | A | G | . |
V | D | V | V | K | V | G | I | G | P | G | S | I | C |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
|
| S |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  | . |  |  |
| S |  |  |  |  |  |  |  |  |  | T | T | . |
| S |  |  |  |  |
| S | S |
|
| T | T | B |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
233 | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | |
. | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | |
. | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 |
  |
  |   |
|
|
|
|
|
|
|
|
|
291 | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | G | G | I | T | G | M | R | R | I | A | D | F | A | S | L | Y | Q | V | R | T | G | S | H | G | P | S | D | L | S | P | V | C | M | A | A | A | L | H | F | D | L |
Query Conservation |   |
. | . | . | . | . | . | . | . | . |   |
|
|
|
|   |   |   |   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |
|
|   |   |
|
|   |
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
| . |
|
|
|
|   |   |   |   |
|
|   |
|
|
|
|   |
|
|
Template Sequence |   |
T | T | R | V | V | A | G | V | G | V | P | Q | V | T | A | I | Y | D | A | A | A | V | A | R | E | Y | G | K | T | I | I | A | . |
D | G | G | I | K | Y | S | G | D | I | V | K | A | L | A | A | G | G |
Template Known Secondary structure |   |
|  |  |  |  | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  | . |  | S |
|
|
| S |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
311 | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | |
. | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|