Job Description P38104 Confidence 22.64% Date Thu Jan 5 11:57:58 GMT 2012 Rank 487 Aligned Residues 153 % Identity 12% Template c1kbiB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome b2; PDBTitle: crystallographic study of the recombinant flavin-binding domain of2 baker's yeast flavocytochrome b2: comparison with the intact wild-3 type enzyme Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	S	I	D	E	A	L	D	D	Y	A	R	H	Q	E	L	G	F	K	A	I	R	V	Q	C	G	I	P	G	M	K	T	T	Y	G	M	S	K	G	K	G	L	A	Y	E	P	A	T	K	G	Q	W	P	E	E	Q	L	W	S	T	E	K	Y	L	D	F	M	P	K	L	F	D	A	V	R	N	K	F	G
Query Conservation
Alig confidence																																																																																	.
Template Conservation																																																																																	.
Template Sequence		N	S	D	R	K	I	T	D	D	L	V	K	N	V	E	K	L	G	V	K	A	L	F	V	T	V	D	A	P	S	L	G	Q	R	E	K	D	M	K	L	K	F	S	N	T	K	T	N	V	E	E	S	Q	G	A	S	R	A	L	S	K	F	I	D	P	S	L	T	W	K	D	I	E	E	L	K	K	K	T	.
Template Known Secondary structure			S	S															T									S		S	S													T	T				S		S	S		S	G	G	G	G	G			S	S	S		T	T												T		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.												.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.					.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		F	N	E	H	L	L	H	D	M	H	H	R	L	T	P	I	E	A	A	R	F	G	K	S	I	E	D	Y	R	M	F	W	M	.	.	.	.	.	.	.	.	.	.	.	E	D	P	T	P	A	E	N	Q	E	C	F	R	L	I	R	Q	.	.	.	.	H	T	V	T	P	I	A	V	G	E	V	F	N	S	I
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence		.												.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation		.												.	.	.	.	.	.
Template Sequence		.	K	L	P	I	V	I	K	G	V	Q	R	.	.	.	.	.	.	T	E	D	V	I	K	A	A	E	I	G	V	S	G	V	V	L	S	N	H	G	G	R	Q	L	D	F	S	R	A	P	I	E	V	L	A	E	T	M	P	I	L	E	Q	R	N	L	K	D	K	L	E	V	F	V	D	G	G	V	R	R	G
Template Known Secondary structure		.		S									S	.	.	.	.	.	.										T	T		S							T	T	T	T	S	S	T	T																	T	T	T	G	G	G	T	S						S	S			S
Template Predicted Secondary structure		.												.	.	.	.	.	.
Template SS confidence
			343	.	.	.	.	.	.	350	.	.	.							.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	D	C	K	Q	L	I	E	E	Q	L	I	D	Y	I	R	T
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		T	D	V	L	K	A	L	C	L	G	.	A	K	G	V	G	L
Template Known Secondary structure											T	.		S
Template Predicted Secondary structure												.
Template SS confidence
		416	.	.	.	420	.	.	.	.	.		.	.	.	.	430	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions