Job Description P45523 Confidence 99.59% Date Thu Jan 5 12:02:53 GMT 2012 Rank 41 Aligned Residues 88 % Identity 35% Template c3cgnA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase; PDBTitle: crystal structure of thermophilic slyd Resolution 2.70 Å

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		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																								.	.																																						.	.	.
Query SS confidence																																								.	.																																						.	.	.
Query Sequence		A	P	K	D	S	D	T	V	V	V	N	Y	K	G	T	L	I	D	G	K	E	F	D	N	S	Y	T	R	G	E	P	L	S	F	R	L	D	G	.	.	V	I	P	G	W	T	E	G	L	K	N	I	K	K	G	G	K	I	K	L	V	I	P	P	E	L	A	Y	G	K	A	G	V	P	G	I	P	.	.	.
Query Conservation																																								.	.																																						.	.	.
Alig confidence																		.									.	.	.	.	.									.	.																																						.	.	.
Template Conservation																		.									.	.	.	.	.
Template Sequence		K	V	G	Q	D	K	V	V	T	I	R	Y	T	L	Q	V	.	E	G	E	V	L	D	Q	G	.	.	.	.	.	E	L	S	Y	L	H	G	H	R	N	L	I	P	G	L	E	E	A	L	E	G	R	E	E	G	E	A	F	Q	A	H	V	P	A	E	K	A	Y	G	P	H	D	P	E	G	V	Q	V	V	P
Template Known Secondary structure		B			T	T												.	T	T							.	.	.	.	.						T	T	S	S		S									T	T		B	T	T									G	G	G	T	T					G	G	G
Template Predicted Secondary structure																		.									.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.						.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
																																																235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	S	T	L	V	F	D	V	E	L	L	D	V	K	P	A	P	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	A	F	P	E	D	A	E	V	V	P	G	A	Q	F	Y	A	Q	D	M	E	G	N	P	M	P	L	T	V	V	A	V	E	G	E	E	V	T	V	D	F	N	H	P	L	A	G	K	D	L	D	F	Q	V	E	V	V	K	V	R	E	A	T	P
Template Known Secondary structure		G	G	G	S		S					S	T	T								S	S	S	S											T	T							S		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions