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Job DescriptionP45523
Confidence100.00%DateThu Jan 5 12:02:53 GMT 2012
Rank4Aligned Residues135
% Identity41%Templatec2vcdA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:outer membrane protein mip; PDBTitle: solution structure of the fkbp-domain of legionella2 pneumophila mip in complex with rapamycin
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  EKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDG
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Template Sequence  NKKADENKVKGEAFLTENKNKPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQVSQ
Template Known Secondary structure  STT
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TTS
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   198.200.........210.........220.........230.. .......240.........250..
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Query Sequence  VIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPG. IPPNSTLVFDVELLDVKPAP
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Template Sequence  VIPGWTEALQLMPAGSTWEIYVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKKSS
Template Known Secondary structure  S
S
TT

GGGTT
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   82.......90.........100.........110.........120.........130.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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