Job Description P45523 Confidence 98.62% Date Thu Jan 5 12:02:53 GMT 2012 Rank 47 Aligned Residues 98 % Identity 20% Template c1w26B_ PDB info PDB header:chaperone Chain: B: PDB Molecule:trigger factor; PDBTitle: trigger factor in complex with the ribosome forms a2 molecular cradle for nascent proteins Resolution 2.7 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	D	S	D	T	V	V	V	N	Y	K	G	T	L	I	D	G	K	E	F	D	N	S	Y	T	R	G	E	P	L	S	F	R	L	D	G	V	I	P	G	W	T	E	G	L	K	N	I	K	K	G	G	K	I	K	L	V	I	P	P	E	L	A	Y	G	K	A	G	V	P	G	I	P	P	N	S	T	L	V
Query Conservation
Alig confidence																.																																																								.	.	.	.
Template Conservation																.																																																								.	.	.	.
Template Sequence		V	E	A	E	D	R	V	T	I	D	F	T	G	S	.	V	D	G	E	E	F	E	G	G	K	A	S	D	F	V	L	A	X	G	Q	G	R	X	I	P	G	F	E	D	G	I	K	G	H	K	A	G	E	E	F	T	I	D	V	T	F	P	E	E	Y	H	A	E	N	L	.	.	.	.	K	G	K	A	A	K
Template Known Secondary structure				T	T											.	B	T	T	B			T	T										S	S	S			S		T	T						T	T			T	T											T	T		S		T	T	T	.	.	.	.	T	T
Template Predicted Secondary structure																.																																																								.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	V	E	L	L	D	V	K	P	A	P	K	A	D	A	K	P	E	A	D	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	I	N	L	K	K	V	E	E	R	E	L	P	E	L	T	A	E	F	I	K	R
Template Known Secondary structure																							G	G
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions