Job Description P14497 Confidence 31.96% Date Thu Jan 5 11:34:04 GMT 2012 Rank 320 Aligned Residues 68 % Identity 13% Template c2zkr6_ PDB info
PDB header: ribosomal protein/rnaChain: 6: PDB Molecule: 60s ribosomal protein l30e;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
Resolution 8.70 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
134 . . . . . 140 . . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210 . .
Predicted Secondary structure
.
Query SS confidence
.
Query Sequence
R Q A I A K L A E H Y G I M F F Y R G Q D P I D G Q L A Q V I N G F R D T Y G L S V I P V S V D G V I N P L L P D S R T D Q G Q A Q R L G V K .
Y F P A M M L V
Query Conservation
.
Alig confidence
. . . . . . . . . . . . . . .
Template Conservation
. . . . . . . . . . . . . .
Template Sequence
K Q T L K M I R Q G K A K L V I L A N N C P A .
.
L R K S E I E Y Y A M L A K T G V H H Y S G N .
.
.
.
.
.
.
.
.
.
.
.
N I E L G T A C G K Y Y R V C T L A I I
Template Known Secondary structure
T T T S . . S T T T T S . . . . . . . . . . . . T S S S
Template Predicted Secondary structure
. . . . . . . . . . . . . .
Template SS confidence
32 . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . .
213 . .
Predicted Secondary structure
Query SS confidence
Query Sequence
D P K
Query Conservation
Alig confidence
Template Conservation
Template Sequence
D P G
Template Known Secondary structure
S S S
Template Predicted Secondary structure
Template SS confidence
98 . 100
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
