Return to main results Retrieve Phyre Job Id

Job DescriptionP14497
Confidence33.83%DateThu Jan 5 11:34:04 GMT 2012
Rank317Aligned Residues46
% Identity4%Templatec2xznU_
PDB info PDB header:ribosomeChain: U: PDB Molecule:ribosomal protein l7ae containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
Resolution3.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170........
Predicted Secondary structure 











Query SS confidence 














































Query Sequence  QQRQAIAKLAEHYGIMFFYRGQDPIDGQLAQVINGFRDTYGLSVIPV
Query Conservation       
  

   


 
    

 
    
 
  

  

  

 
Alig confidence 
























.




















Template Conservation 
  
  


    
 




 
  
.      
  

 
  

 
 
Template Sequence  GLHEVLRTIEAKQALFVCVAEDCDQ. GNYVKLVKALCAKNEIKYVSV
Template Known Secondary structure  ST

SSS

S.TTTT

Template Predicted Secondary structure 








.



Template SS confidence 














































   28.30.........40.........50.. .......60.........70...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions