 |
Job Description | P14497 | Confidence | 98.90% | Date | Thu Jan 5 11:34:04 GMT 2012 |
Rank | 167 | Aligned Residues | 96 |
% Identity | 16% | Template | c2vafA_ |
PDB info |
PDB header:metal-binding protein | Chain: A: PDB Molecule:calsequestrin-2; |
PDBTitle: crystal structure of human cardiac calsequestrin
|
Resolution | 3.80 Å |
|
 |
  |   |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 160 | . | . | . | . | . | . | . | . | . | 170 | . | |
|
. | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | Q | Q | R | Q | A | I | A | K | L | A | E | H | Y | G | I | M | F | F | Y | R | G | Q | D | P | I | D | G | . |
. |
. |
. |
. |
Q | L | A | Q | V | I | N | G | F | R | D | T | Y | . |
. |
G | L | S | V | I | P | V | S | V | D | G | V | I | N | P | L | L | P | D | S | R | T | D | Q | G | Q | A | Q | R | L | G |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|
|
|   |
|   |   |   |   |
|
|   |
|   | . | . | . | . | . |   |   |   |
|   |
|   |   |
|
|   |   |
| . | . |
|   |   |
|
|   |
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |   |
|   |   | . | . |   |   |   |   |
|
|   |
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|
| . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |
|
|   |   |   |   |
Template Sequence |   |
E | K | N | F | K | Q | V | L | K | K | . |
. |
Y | D | L | L | C | L | Y | Y | H | E | P | V | S | S | D | K | V | T | Q | K | Q | F | Q | L | K | E | I | V | L | E | L | V | A | Q | V | L | E | H | K | A | I | G | F | V | M | V | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
A | K | K | E | A | K | L | A | K | K | L | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | . |
| S |  |  |  |  |  |  |
|
|
|
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | S | S |  |  |  |  |  |  | T | S | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1020 | . | . | . | . | . | . | . | . | . | |
|
1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | 1080 | . | . | . | . | . | . | . | . |
  |
  |   |
203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | K | Y | F | P | A | M | M | L | V | D | P | K | Q | G | S | V | R | P | L | S | Y | G | F | I | S | Q | D | D | L | A | K | Q | F | L | N | V |
Query Conservation |   |
|   |   |   |
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|
|   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|
|   |   |   |   | . |   |   |   |   |   | . | . |   |
|   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |
Template Sequence |   |
F | D | E | E | G | S | L | Y | I | L | K | . |
G | D | R | T | I | . |
. |
E | F | D | G | E | F | A | A | D | V | L | V | E | F | L | L | D | L |
Template Known Secondary structure |   |
|
| S | S |
|
|  |  |  |  | S | . | S | T | T |  |  | . | . |
|
|
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  | . |
|
|  |  |  | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1089 | 1090 | . | . | . | . | . | . | . | . | . | |
1100 | . | . | . | . | |
|
. | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|