Return to main results Retrieve Phyre Job Id

Job DescriptionP14497
Confidence98.90%DateThu Jan 5 11:34:04 GMT 2012
Rank167Aligned Residues96
% Identity16%Templatec2vafA_
PDB info PDB header:metal-binding proteinChain: A: PDB Molecule:calsequestrin-2; PDBTitle: crystal structure of human cardiac calsequestrin
Resolution3.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   130.........140.........150........ .160.........170. ........180.........190.........200..
Predicted Secondary structure 









.......
















Query SS confidence 




























. . . . .












. .






























Query Sequence  QAQQRQAIAKLAEHYGIMFFYRGQDPIDG. . . . . QLAQVINGFRDTY. . GLSVIPVSVDGVINPLLPDSRTDQGQAQRLG
Query Conservation         
  

   


 
    

 
 .....   
 
  

  
..
  

 

 

     
        

   
Alig confidence 









..
















.....












..









.........











Template Conservation    

   
  ..    

 





  
               
        
    

.........
     

    
Template Sequence  EKNFKQVLKK. . YDLLCLYYHEPVSSDKVTQKQFQLKEIVLELVAQVLEHKAIGFVMVD. . . . . . . . . AKKEAKLAKKLG
Template Known Secondary structure  ..
S






TT

TT
.........SSTSTT
Template Predicted Secondary structure 
..















.........





Template SS confidence 















































































   1020......... 1030.........1040.........1050.........1060.........1070...... ...1080........
 
   203......210.........220.........230.........
Predicted Secondary structure 













Query SS confidence 




































Query Sequence  VKYFPAMMLVDPKQGSVRPLSYGFISQDDLAKQFLNV
Query Conservation 
   


 

      
  
  
  
 


  

  
Alig confidence 










.




..

















Template Conservation 
   


    .     .. 
 
      
  

   
Template Sequence  FDEEGSLYILK. GDRTI. . EFDGEFAADVLVEFLLDL
Template Known Secondary structure 

SS

S.STT..


S


Template Predicted Secondary structure 




.

..





Template SS confidence 




































   10891090......... 1100.... .....1110.........1120..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions