Job Description P14497 Confidence 99.23% Date Thu Jan 5 11:34:04 GMT 2012 Rank 99 Aligned Residues 84 % Identity 18% Template c2j23A_ PDB info PDB header:immune protein Chain: A: PDB Molecule:thioredoxin; PDBTitle: cross-reactivity and crystal structure of malassezia2 sympodialis thioredoxin (mala s 13), a member of a new pan-3 allergen family Resolution 1.41 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		A	E	H	Y	G	I	M	F	F	Y	R	G	Q	D	P	I	D	G	Q	L	A	Q	V	I	N	G	F	R	D	T	Y	.	G	L	S	V	I	P	V	S	V	D	G	V	I	N	P	L	L	P	D	S	R	T	D	Q	G	Q	A	Q	R	L	G	V	K	Y	F	P	A	M	M	L	V	D	P	K	Q	G	S	V
Query Conservation																																	.
Alig confidence																																	.											.	.	.	.	.	.	.	.	.																							.
Template Conservation																																												.	.	.	.	.	.	.	.	.																							.
Template Sequence		G	D	K	V	V	V	I	D	F	W	A	T	W	C	G	P	C	K	M	I	G	P	V	F	E	K	I	S	D	T	P	A	G	D	K	V	G	F	Y	K	V	D	.	.	.	.	.	.	.	.	.	V	D	E	Q	S	Q	I	A	Q	E	V	G	I	R	A	M	P	T	F	V	F	F	.	K	N	G	Q	K	I
Template Known Secondary structure		S	S	S									T	T		S	T													T	S	T					S							.	.	.	.	.	.	.	.	.	T	T	T									T			S	S	S						.		T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	L	S	Y	G	F	I	S	Q	D	D	L	A	K	Q	F
Query Conservation
Alig confidence					.				.
Template Conservation					.				.
Template Sequence		D	T	V	.	V	G	A	.	D	P	S	K	L	Q	A	A	I
Template Known Secondary structure					.		S	S	.
Template Predicted Secondary structure					.				.
Template SS confidence
		87	.	.		90	.	.		.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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