Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7A7
Confidence7.24%DateThu Jan 5 11:05:13 GMT 2012
Rank69Aligned Residues91
% Identity18%Templated1svda1
SCOP infoTIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   224.....230.........240 .........250.........260.........270.........280.........290..
Predicted Secondary structure 



...........






Query SS confidence 
















. . . . . . . . . . .



















































Query Sequence  RAIAKAVEDEARSKKIS. . . . . . . . . . . HEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWNRLYQGINVHNAERVRQ
Query Conservation    
  

   
   
  ...........       
   
 

    
   

     
  
   

  
 
     

 
Alig confidence 
















...........











.




..................















Template Conservation   
  


  
   

   


 


      
  

  
 .
 

 ..................  

     
  

  
Template Sequence  LFVQDATETAEAQTGERKGHYLNVTAPTPEEMYKRAEFAK. EIGAP. . . . . . . . . . . . . . . . . . IIMHDYITGGFTANTG
Template Known Secondary structure  SS




SS.T

..................TTTT
Template Predicted Secondary structure 







.



..................
Template SS confidence 















































































   212.......220.........230.........240.........250. ..... ...260.........270..
 
   293...... 300.........310.........320.........330.... .....340.........
Predicted Secondary structure 



..









.





Query SS confidence 






. .


































.














Query Sequence  LAHDGHE. . LVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGIN. LNFWPAGPIFRRLGA
Query Conservation        
..

  
 


  
 



  
       
 



 
.
     
 


  

Alig confidence 



.

..













...............





.














Template Conservation 
   .     


 

 
  

 ............... 
    


  

 

 




Template Sequence  LAKW. CQDNGVLLHIHRAMHAVI. . . . . . . . . . . . . . . DRNPNHGIHFRVLTKILRLSGG
Template Known Secondary structure  .T

TT...............S
TTSS



Template Predicted Secondary structure  .









...............








Template SS confidence 



























































   273... ...280.........290.... .....300.........310......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions