Job Description P0A7A7 Confidence 12.09% Date Thu Jan 5 11:05:13 GMT 2012 Rank 34 Aligned Residues 54 % Identity 17% Template c2vt1B_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:surface presentation of antigens protein spas; PDBTitle: crystal structure of the cytoplasmic domain of spa40, the2 specificity switch for the shigella flexneri type iii3 secretion system Resolution 2.00 Å

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		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		S	R	A	I	A	K	A	V	E	D	E	A	R	S	K	K	I	S	H	E	K	A	Q	Q	N	A	I	A	L	M	E	.	.	E	I	A	A	N	F	S	Y	E	M	I	R	L	T	D	R	I	L	G	F	T	W	N
Query Conservation																																	.	.
Alig confidence																																	.	.
Template Conservation
Template Sequence		T	N	Q	C	A	L	A	V	R	K	Y	A	N	E	V	G	I	P	T	V	R	D	V	K	L	A	R	K	L	Y	K	T	H	T	K	Y	S	F	V	D	F	E	H	L	D	E	V	L	R	L	I	V	W	L	E	Q
Template Known Secondary structure																T	T																			S	S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions