 |
Job Description | P22106 | Confidence | 98.31% | Date | Wed Jan 25 15:20:42 GMT 2012 |
Rank | 54 | Aligned Residues | 86 |
% Identity | 15% | Template | c3uowB_ |
PDB info |
PDB header:ligase | Chain: B: PDB Molecule:gmp synthetase; |
PDBTitle: crystal structure of pf10_0123, a gmp synthetase from plasmodium2 falciparum
|
Resolution | 2.72 Å |
|
 |
  |   |
209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | N | E | L | R | Q | A | L | E | D | S | V | K | S | H | L | M | S | D | V | P | Y | G | V | L | L | S | G | G | L | D | S | S | I | I | S | A | I | T | K | K | Y | A | A | R | R | V | E | D | Q | E | R | S | E | A | W | W | P | Q | L | H | S | F | A | V | G | L | P | G | S | P | D | L | K | A | A | Q | E | V | A |
Query Conservation |   |
  |   |   |
|
|   |   |
|   |   |
|
|   |   |
|
|   |
|
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |
|   |   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   | . |
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|
|
|   |   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
P | I | R | Y | H | E | L | E | L | K | N | I | E | K | Y | K | . |
H | D | H | Y | V | I | A | A | M | S | G | G | I | D | S | T | V | A | A | A | Y | T | H | K | I | F | K | E | R | F | F | G | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | I | D | N | G | L | L | R | K | N | E | A | E | N | V | Y | T | F | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | G | G | G | T | . | T | T |
|  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
| S |
| S |
| T | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
237 | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | |
. | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . |
  |
  |   |
289 | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | H | L | G | T | V | H | H | E | I | H | F | T | V | Q | E | G | L |
Query Conservation |   |
  |   |
|
|   |   |
|   |   |
|   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
Template Sequence |   |
K | S | T | F | P | D | M | N | I | T | K | I | D | A | S | E | N | F |
Template Known Secondary structure |   |
 |  |  |
| T | T |
|  |  |  |  |  |  |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
305 | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|