Job Description P22106 Confidence 98.84% Date Wed Jan 25 15:20:42 GMT 2012 Rank 32 Aligned Residues 182 % Identity 16% Template c3dpiA_ PDB info PDB header:ligase Chain: A: PDB Molecule:nad+ synthetase; PDBTitle: crystal structure of nad+ synthetase from burkholderia pseudomallei Resolution 2.20 Å

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		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	V	T	D	K	N	E	L	R	Q	A	L	E	D	S	V	K	S	H	L	M	S	D	V	P	Y	G	V	L	L	S	G	G	L	D	S	S	I	I	S	A	I	T	K	K	Y	A	A	R	R	V	E	D	Q	E	R	S	E	A	W	W	P	Q	L	H	S	F	A	V	G	L	P	G	S	P	D	L	K	A
Query Conservation
Alig confidence																						.	.																																			.	.	.	.	.	.	.
Template Conservation																						.	.																																			.	.	.	.	.	.	.
Template Sequence		D	A	R	D	E	A	E	R	R	I	G	F	V	A	D	Y	L	R	T	A	.	.	G	L	R	A	C	V	L	G	I	S	G	G	I	D	S	S	T	A	G	R	L	A	Q	L	A	V	E	R	L	R	A	S	G	Y	.	.	.	.	.	.	.	D	A	R	F	V	A	M	R	L	P	Y	G	A	E	A	D	A
Template Known Secondary structure																						.	.	T										S	S																				T	T		.	.	.	.	.	.	.											S
Template Predicted Secondary structure																						.	.																																			.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.								.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.								.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.													.
Query SS confidence																																																									.	.	.	.	.	.	.													.
Query Sequence		A	Q	E	V	A	N	H	L	G	T	V	H	H	E	I	H	F	T	V	Q	E	G	L	D	A	I	R	D	V	I	Y	H	I	E	T	Y	D	V	T	T	I	R	A	S	T	P	M	Y	L	M	S	R	K	I	K	.	.	.	.	.	.	.	A	M	G	I	K	M	V	L	S	G	E	G	.	S	D	E	V	F
Query Conservation																																																									.	.	.	.	.	.	.													.
Alig confidence														.	.																																										.	.	.	.	.	.	.													.
Template Conservation														.	.
Template Sequence		R	R	A	L	A	F	V	R	A	D	E	T	.	.	L	T	V	D	V	K	P	A	A	D	A	M	L	A	A	L	A	A	G	G	L	A	Y	L	D	H	A	Q	Q	D	F	V	L	G	N	I	K	A	R	E	R	M	I	A	Q	Y	A	V	A	G	A	R	N	G	V	V	I	G	T	D	H	A	A	E	S	V
Template Known Secondary structure											S			.	.																			T	T																																T	T				B
Template Predicted Secondary structure														.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	Y	L	Y	F	H	K	A	P	N	A	K	E	L	H	E	E	T	V	R	K	L	L	A	L	H	M	Y	D	C	A	R	A	N	K	A	M	S	A	W	G	V	E	A	R	V	P	F	L	D	K	K	F	L	D	V	A	M	R	I	N	P	Q	D	K	M	C	G	N	G	K	M	E	K	H	I	L	R	E
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	G	F	F	T	K	F	G	D	G	G	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	P	L	A	G	L	T	K	R	R	V	R	A
Template Known Secondary structure														S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		T	T	T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.																																																						.	190	.	.	.	.	.	.	.	.	.	200	.	.
		436	.	.	.	440		.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		C	F	E	A	Y	.	L	P	A	S	V	A	W	R	Q
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		L	A	R	M	L	G	A	D	E	P	L	V	L	K	T
Template Known Secondary structure						T	T							T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions