Job Description P22106 Confidence 98.55% Date Wed Jan 25 15:20:42 GMT 2012 Rank 43 Aligned Residues 147 % Identity 23% Template c2vdcF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:glutamate synthase [nadph] large chain; PDBTitle: the 9.5 a resolution structure of glutamate synthase from2 cryo-electron microscopy and its oligomerization behavior3 in solution: functional implications. Resolution 9.50 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.																															.										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.																															.										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	W	S	G	I	Y	A	S	D	N	A	I	L	A	H	E	R	L	S	I	V	D	V	N	A	.	.	G	A	Q	P	L	Y	N	Q	Q	K	T	H	V	L	A	V	N	G	E	I	Y	N	H	Q	A	L	R	A	E	Y	.	G	D	R	Y	Q	F	Q	T	G	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																												.	.																															.										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.							.	.	.	.	.	.																			.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.
Template Sequence		P	D	L	L	D	E	R	F	E	S	D	F	A	I	Y	H	Q	R	Y	S	T	N	T	F	P	T	W	P	L	A	Q	P	F	R	.	.	.	.	.	.	M	L	A	H	N	G	E	I	N	T	V	K	G	N	V	N	W	M	K	A	H	E	T	R	M	E	H	P	A	F	G	T	H	M	Q	D	L	K	P	V
Template Known Secondary structure		G	G	G	G		T	T			B	S										S		S				G	G	G	S	S			S	.	.	.	.	.	.	S								T	T													T	T				S	T	T	G	G	G						S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.							.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
							98	.	100	.	.	.	.	.	.	.	.																																				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	S	D	C	E	V	I	L	A	L	Y	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	G	P	E	F	L	D	D	L	Q	G	M	F	A	F	A	L	Y	D	S	E	K	D	A	Y	L	I	G
Query Conservation		.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																																																																										.	.
Template Sequence		I	G	V	G	L	S	D	S	G	S	L	D	T	V	F	E	V	M	V	R	A	G	R	T	A	P	M	V	K	M	M	L	V	P	Q	A	L	T	S	S	Q	T	T	P	D	N	H	K	A	L	I	Q	Y	C	N	S	V	M	E	P	W	D	G	P	A	A	L	A	M	T	D	G	.	.	R	W	V	V	G	G
Template Known Secondary structure		S		T	T																	T	T											S							S	T	T	S															S					S	S							S	S	.	.	S
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.			.	340	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.				.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		R	D	H	L	G	I	I	P	L	Y	M	G	Y	D	E	H	G	Q	L	Y	V	A	S	E	M	K	A	L	V	P	V	C	R	T	I	.	.	.	K	E	F	P	A	G	S	Y	L	W	S	Q	D	G	E
Query Conservation																																					.	.	.
Alig confidence																																					.	.	.
Template Conservation
Template Sequence		M	D	R	N	G	L	R	P	M	R	Y	T	I	T	T	D	G	L	I	I	G	G	S	E	T	G	M	V	K	I	D	E	T	Q	V	I	E	K	G	R	L	G	P	G	E	M	I	A	V	D	L	Q	S
Template Known Secondary structure				T	T			S								T	T	S						S	S	S		S	S				G	G	G									T	T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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