Job Description P22106 Confidence 99.55% Date Wed Jan 25 15:20:42 GMT 2012 Rank 21 Aligned Residues 233 % Identity 18% Template c2e18B_ PDB info PDB header:ligase Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: crystal structure of project ph0182 from pyrococcus horikoshii ot3 Resolution 2.10 Å

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		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	E	L	R	Q	A	L	E	D	S	V	K	S	H	L	M	S	D	V	P	Y	G	V	L	L	S	G	G	L	D	S	S	I	I	S	A	I	T	K	K	Y	A	A	R	R	V	E	D	Q	E	R	S	E	A	W	W	P	Q	L	H	S	F	A	V	G	L	P	G	S	P	D	L	K	A	A	Q	E	V	A
Query Conservation
Alig confidence																.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	D	K	V	I	E	R	I	L	E	F	I	R	E	.	.	K	G	N	N	G	V	V	I	G	I	S	G	G	V	D	S	A	T	V	A	Y	L	A	T	K	A	L	G	K	E	.	.	.	.	.	.	.	.	.	.	.	.	K	V	L	G	L	I	M	P	Y	F	E	N	K	D	V	E	D	A	K	L	V	A
Template Known Secondary structure																.	.			T	T								S	S																G	G	.	.	.	.	.	.	.	.	.	.	.	.	G								S	S		S
Template Predicted Secondary structure																.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.													50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		N	H	L	G	T	V	H	H	E	I	H	F	T	V	Q	E	G	L	D	A	I	R	D	V	I	Y	H	I	E	T	Y	D	V	T	T	I	R	A	S	.	T	P	M	Y	L	M	S	R	K	I	K	A	M	G	I	K	M	V	L	S	G	E	G	S	D	E	V	F	G	G	Y	L	Y	F	H	K	A	P	N	A
Query Conservation																																									.
Alig confidence															.	.																									.																						.
Template Conservation															.	.																																															.
Template Sequence		E	K	L	G	I	G	Y	K	V	I	N	I	K	.	.	P	I	V	D	S	F	V	E	N	L	E	L	N	L	D	R	K	G	L	G	N	I	M	S	R	T	R	M	I	M	L	Y	A	H	A	N	S	L	G	R	I	V	L	G	T	S	.	N	R	S	E	F	L	T	G	Y	F	T	K	W	G	D	G	A	S
Template Known Secondary structure					T										.	.												S																											T								.								T		S		T	T	T	T	T		S
Template Predicted Secondary structure															.	.																																															.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		K	E	L	H	E	E	T	V	R	K	L	L	A	L	H	M	Y	D	C	A	R	A	N	K	A	M	S	A	W	G	V	E	A	R	V	P	F	L	D	K	K	F	L	D	V	A	M	R	I	N	P	Q	D	K	M	C	G	N	G	K	M	E	K	H	I	L	R	E	C	F	E	A	Y	.	L	P	A	S	V	A
Query Conservation																																																																											.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	P	I	I	N	L	Y	K	T	E	V	W	E	I	A	K	R	I	G	V	P	E	R	I	V
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		T	T	T	T	S												T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		149																																																						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		447	.	.		450	.	.	.	.	.									.	.	.	.	460	.	.	.	.		.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure					.							.	.	.	.	.	.	.	.										.
Query SS confidence					.							.	.	.	.	.	.	.	.										.
Query Sequence		W	R	Q	.	K	E	Q	F	S	D	.	.	.	.	.	.	.	.	G	V	G	Y	S	W	I	D	T	.	L	K	E	V	A	A	Q	Q	V	S	D	Q	Q	L	E	T	A	R	F	R	F	P	Y	N	T	P	T	S	K	E	A	Y	L	Y	R	E	I	F	E	E	L	F	P	L	P	S	A	A	E	C	V	P
Query Conservation					.							.	.	.	.	.	.	.	.										.
Alig confidence					.							.	.	.	.	.	.	.	.										.																				.	.	.	.	.	.	.	.	.																						.
Template Conservation																																																	.	.	.	.	.	.	.	.	.																						.
Template Sequence		K	K	K	P	S	A	G	L	W	E	G	Q	T	D	E	D	E	L	G	I	S	Y	N	L	L	D	E	I	L	W	R	M	I	D	L	K	I	G	K	E	E	I	A	K	D	L	G	.	.	.	.	.	.	.	.	.	I	P	L	S	L	V	E	R	V	E	E	L	I	K	K	S	E	H	K	R	R	.	L	P
Template Known Secondary structure			S						S	S	T	T								T	S														T	S												T	.	.	.	.	.	.	.	.	.	S														T	T	G	G	G	S	S	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.										.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.
		517	.	.	520	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	P	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	P	S	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions