Job Description P22106 Confidence 27.81% Date Wed Jan 25 15:20:42 GMT 2012 Rank 81 Aligned Residues 115 % Identity 13% Template c2b8tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: crystal structure of thymidine kinase from u.urealyticum in2 complex with thymidine Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	V	L	L	S	G	G	L	D	S	S	I	I	S	A	I	T	K	K	Y	A	A	R	R	V	E	D	Q	E	R	S	E	A	W	W	P	Q	L	H	S	F	A	V	G	L	P	G	S	P	D	L	K	A	A	Q	E	V	A	N	H	L	G	T	V	H	H	E	I	H	F	T	V	Q	E	G	L	D	A	I
Query Conservation
Alig confidence									.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	G	P	M	F	A	G	.	.	K	T	A	E	L	I	R	R	L	H	R	L	E	Y	A	D	V	K	Y	L	V	F	K	P	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	R	S	I	R	N	I	Q	S	R	T	G	T	S	L	P	S	V	E	V	E	S	A	P	E	I	L	N	Y
Template Known Secondary structure				S	T	T	S		.	.															T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G		S	S								S	S						S	S	T
Template Predicted Secondary structure									.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.					330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.				.	.	.	.	.	.	.	360	.
Predicted Secondary structure																						.	.	.	.																								.	.	.
Query SS confidence																						.	.	.	.																								.	.	.
Query Sequence		R	D	V	I	Y	H	I	E	T	Y	D	V	T	T	I	R	A	S	T	P	.	.	.	.	M	Y	L	M	S	R	K	I	K	A	M	G	I	K	M	V	L	S	G	E	G	S	D	.	.	.	E	V	F	G	G	Y	L	Y	F
Query Conservation																						.	.	.	.																								.	.	.
Alig confidence																						.	.	.	.																								.	.	.
Template Conservation
Template Sequence		I	M	S	N	S	F	N	D	E	T	K	V	I	G	I	D	E	V	Q	F	F	D	D	R	I	C	E	V	A	N	I	L	A	E	N	G	F	V	V	I	I	S	G	L	D	K	N	F	K	G	E	P	F	G	P	I	A	K	L
Template Known Secondary structure				S	T	T	S		T	T								S	G	G	G	S		T												T	T									S	B		T	T	S	S	B		T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions