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Job DescriptionP22106
Confidence100.00%DateWed Jan 25 15:20:42 GMT 2012
Rank3Aligned Residues399
% Identity25%Templatec1m1zB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:beta-lactam synthetase; PDBTitle: beta-lactam synthetase apo enzyme
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.... .....40.........50...... ...60.........70.........80.........90.
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Query Sequence  LSRLMRHRGPD. . . . WSGIYASDNAILAHERLSIVDV. . . . . . . . NAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDR
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Template Sequence  FLASARTGGPGPVFATRGSHTDIDTPQGERSLAATLVHAPSVAPDRAVARSLT. . GAPTTAVLAGEIYNRDELLSVL. . P
Template Known Secondary structure 
S






SS
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TTGGGS

TTS

GGG
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   12.......20.........30.........40.........50.........60.... .....70.........80...... .
 
   92.......100.........110.........120.........130.........140.........150.........160......
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Query Sequence  YQFQTGSDCEVILALYQEKGPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALV. . . . .
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Template Sequence  AGPAPEGDAELVLRLLERYDLHAFRLVNGRFATVVRT. . GDRVLLATDHAGSVPLYTCVAPG. EVRASTEAKALAAHRDP
Template Known Secondary structure  SSS

SSGGGGGGT

..TT
TT

S

TT.S
TSSS
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   91........100.........110.........120....... ..130.........140.........150 .........160.......
 
   167..170.........180...... ...190.........200.........210.........220.........230...
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Query Sequence  . . . . . . . . . . . PVCRTIKEFPAGSYLWSQDG. . EIRSYYHRDWFDYDAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVL
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Template Sequence  KGFPLADARRVAGLTGVYQVPAGAVMDIDLGSGTAVTHRTWTPGLSRRILPEGEAVAAVRAALEKAVAQRVTPGDTPLVV
Template Known Secondary structure 




TT

TT
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SSTTTT





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TS
TT


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   168.170.........180.........190.........200.........210.........220.........230.........240.......
 
   234.....240.........250.........260.........270.........280.........290.........300.........310...
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Query Sequence  LSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVI
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Template Sequence  LSGGIDSSGVAACAHRAAG. . . . . . . . . . . . . . ELDTVSMGTDTSNEFREARAVVDHLRTRHREITIPTTELLAQLPYAV
Template Known Secondary structure 

SSS..............S
SS


T

TT
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   248.250.........260...... ...270.........280.........290.........300.........310...
 
   314.....320.........330.........340.........350.........360.........370.........380.........390...
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Query Sequence  YHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKAM
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Template Sequence  WASESVDPDIIEYLLPLTALYRALDGPE. RRILTGYGADIPLGGMHLP. . . . . . . ALDTVLAHDMATFD. GLNEMSPVLS
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SS
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TTTTTT

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T.T

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T
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   314.....320.........330.........340. ........350.........360 .........370.... .....380....
 
   394.....400.........410.........420.........430.........440.........450....
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Query Sequence  SAWGVEARVPFLDKKFLDVAMRINPQDKMCGNGKMEKHILRECFEAYLPASVAWRQKEQFS
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Template Sequence  TLAGHWTTHPYWDREVLDLLVSLEAGLKR. . RHGRDKWVLRAAMADALPAETVNRTTSSFS
Template Known Secondary structure  TTT

GGGSS
S..BTTBTTTTTTS
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   389390.........400.........410....... ..420.........430.........440.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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