Job Description P22106 Confidence 98.76% Date Wed Jan 25 15:20:42 GMT 2012 Rank 35 Aligned Residues 171 % Identity 16% Template c1gpmD_ PDB info PDB header:transferase (glutamine amidotransferase) Chain: D: PDB Molecule:gmp synthetase; PDBTitle: escherichia coli gmp synthetase complexed with amp and pyrophosphate Resolution 2.20 Å

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		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		K	N	E	L	R	Q	A	L	E	D	S	V	K	S	H	L	M	S	D	V	P	Y	G	V	L	L	S	G	G	L	D	S	S	I	I	S	A	I	T	K	K	Y	A	A	R	R	V	E	D	Q	E	R	S	E	A	W	W	P	Q	L	H	S	F	A	V	G	L	P	G	S	P	D	L	K	A	A	Q	E	.	V
Query Conservation																																																																																.
Alig confidence																				.																																.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																				.																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	K	I	I	D	D	A	V	A	R	I	R	E	Q	V	G	D	.	D	K	V	I	L	G	L	S	G	G	V	D	S	S	V	T	A	M	L	L	H	R	A	I	G	K	N	L	T	C	V	.	.	.	.	.	.	.	.	.	.	.	F	V	D	N	G	L	L	R	L	N	E	A	E	Q	V	L	D	M	F
Template Known Secondary structure																		T	T	.									S	S															G	G	G					.	.	.	.	.	.	.	.	.	.	.					S		S		T	T
Template Predicted Secondary structure																				.																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.												.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	H	L	G	T	V	H	H	E	I	H	F	T	V	Q	E	G	L	D	A	I	R	D	V	I	Y	H	I	E	T	Y	D	V	T	T	I	R	A	S	T	P	M	Y	L	M	S	R	K	I	K	A	M	G	I	K	M	V	L	S	G	E	G	S	D	E	V	F	G	G	Y	L	Y	F	H	K	A	P	N	A
Query Conservation
Alig confidence															.																			.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.																			.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	H	F	G	L	N	I	V	H	V	P	A	.	E	D	R	F	L	S	A	L	A	G	E	N	D	P	E	A	K	R	.	.	K	I	I	G	R	V	F	V	E	V	F	D	E	E	A	L	K	L	E	D	V	K	W	L	A	Q	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	T										.									S	S									.	.																		S	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.																			.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		K	E	L	H	E	E	T	V	R	K	L	L	A	L	H	M	Y	D	C	A	R	A	N	K	A	M	S	A	W	G	V	E	A	R	V	P	F	L	D	K	K	F	L	D	V	A	M	R	I	N	P	Q	D	K	M	C	G	N	G	K	M	E	K	H	I	L	R	E	C	F	E	A	Y	.	L	P	A	S	V	A
Query Conservation																																																																											.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	P	D	V	I	E	M	K	M	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	P	L	K	E	L	F	K	D	E	V	R	K	I	G	L	E	L	G	L	P	Y	D	M	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	T													T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																					337	.	.	340	.	.	.	.	.	.	.	.																								.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		447	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	Q	K	E	Q	F	S	D	G
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		Y	R	H	.	.	P	F	P	G	P
Template Known Secondary structure		T	S		.	.				T	T
Template Predicted Secondary structure					.	.
Template SS confidence
		399	400	.			.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions