Job Description P22106 Confidence 100.00% Date Wed Jan 25 15:20:42 GMT 2012 Rank 10 Aligned Residues 236 % Identity 25% Template c1ecjB_ PDB info PDB header:transferase Chain: B: PDB Molecule:glutamine phosphoribosylpyrophosphate PDBTitle: escherichia coli glutamine phosphoribosylpyrophosphate2 (prpp) amidotransferase complexed with 2 amp per tetramer Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																													.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	S	I	F	G	V	F	D	I	K	T	D	A	V	E	L	R	K	K	A	L	E	L	S	R	L	M	R	H	R	G	P	D	W	S	G	I	Y	A	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	I	L	A	H	E	R	L	S	I
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		C	G	I	V	G	I	A	G	V	M	P	V	.	.	.	.	N	Q	S	I	Y	D	A	L	T	V	L	Q	H	R	G	Q	D	A	A	G	I	I	T	I	D	A	N	N	C	F	R	L	R	K	A	N	G	L	V	S	D	V	F	E	A	R	H	M	Q	R	L	Q	G	N	M	G	I	G	H	V	R	Y	P	T
Template Known Secondary structure										S	S			.	.	.	.												G	G	G			S									T	T	S									S																S	S										B
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.					.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		54	.	.	.	.			.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure							.	.						.																										.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.						.																										.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	V	N	A	.	.	G	A	Q	P	L	.	Y	N	Q	Q	K	T	H	V	L	A	V	N	G	E	I	Y	N	H	Q	A	L	R	A	E	Y	.	.	G	D	R	Y	Q	F	Q	T	G	S	D	C	E	V	I	L	A	L	Y	Q	E	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation							.	.						.																										.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.						.																										.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	S	S	S	A	S	E	A	Q	P	F	Y	V	N	S	P	Y	G	I	T	L	A	H	N	G	N	L	T	N	A	H	E	L	R	K	K	L	F	E	E	K	R	R	H	I	N	T	T	S	D	S	E	I	L	L	N	I	F	A	S	E	L	D	N	F	R	H	Y	P	L	E	A	D	N	I	F	A	A	I
Template Known Secondary structure		T	T	B		S	S	S			S							S	S											T	T																		S	S															T	T			S	S	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.																	.
Query SS confidence																																											.	.	.	.																	.
Query Sequence		P	E	F	L	D	D	L	Q	G	M	F	A	F	A	L	Y	D	S	E	K	D	A	Y	L	I	G	R	D	H	L	G	I	I	P	L	Y	M	G	Y	D	E	.	.	.	.	H	G	Q	L	Y	V	A	S	E	M	K	A	L	V	P	V	.	C	R	T	I	K	E	F	P	A	G	S	Y	L	W	S	Q	D	G
Query Conservation																																											.	.	.	.																	.
Alig confidence																			.																								.	.	.	.																	.
Template Conservation																			.
Template Sequence		A	A	T	N	R	L	I	R	G	A	Y	A	C	V	A	M	I	.	I	G	H	G	M	V	A	F	R	D	P	N	G	I	R	P	L	V	L	G	K	R	D	I	D	E	N	R	T	E	Y	M	V	A	S	E	S	V	A	L	D	T	L	G	F	D	F	L	R	D	V	A	P	G	E	A	I	Y	I	T	E	E
Template Known Secondary structure																			.	T	T	T								T	T			S											T	T								S	S	T					T	T	T									T	T							T	T
Template Predicted Secondary structure																			.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.														.	210	.	.	.	.	.	.	.	.	.	220	.	.	.								.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Query Sequence		E	I	R	S	Y	Y	H	R	D	W	F	D	Y	D	A	V	K	D	N	V	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	E	L	R	Q	A	L	E	D	S	V	K	S	H	.	.	.	.	.	.	.	L	M	S	D	V	P	Y	G	V	L	L	S	G	G	L	D	S	S	I	I	S	A	I
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.
Template Sequence		G	Q	L	F	T	R	Q	C	A	D	N	P	V	S	N	P	C	L	F	E	Y	V	Y	F	A	R	P	D	S	F	I	D	K	I	S	V	Y	S	A	R	V	N	M	G	T	K	L	G	E	K	I	A	R	E	W	E	D	L	D	I	D	V	V	I	P	I	P	.	.	.	.	.	E	T	S	C	D	I	A	L
Template Known Secondary structure		S								S	S	S						B						T	T	S		T	T				T	T																						T		S	S									T	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																																					.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.						.	.	.	.	.	.	.	310
		247
Predicted Secondary structure
Query SS confidence
Query Sequence		T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		311

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions