Return to main results Retrieve Phyre Job Id

Job DescriptionP56579
Confidence4.43%DateThu Jan 5 12:06:24 GMT 2012
Rank21Aligned Residues18
% Identity28%Templatec1y4eA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:sodium/hydrogen exchanger 1; PDBTitle: nmr structure of transmembrane segment iv of the nhe12 isoform of the na+/h+ exchanger
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80.........90....
Predicted Secondary structure 


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Query Sequence  FVFCNPMTLSLGRFMPEK
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Template Sequence  LFLLPPIILDAGYFLPLR
Template Known Secondary structure  S

SSTTGGG
Template Predicted Secondary structure 








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   163......170.........180
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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