Job Description P0AF86 Confidence 2.28% Date Thu Jan 5 11:25:35 GMT 2012 Rank 80 Aligned Residues 40 % Identity 10% Template d2eiaa2 SCOP info Retrovirus capsid protein, N-terminal core domain Retrovirus capsid protein, N-terminal core domain Retrovirus capsid protein, N-terminal core domain Resolution 2.70

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	T	W	A	A	I	E	I	N	N	H	Q	A	R	N	M	D	D	V	Q	S	L	G	V	I	Y	I	N	H	N	F	A	T	E	S	E	A	R	Q	A	L	N	E	E	T	D	A
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.
Template Sequence		F	G	I	L	S	V	D	C	T	S	E	E	M	N	A	F	L	D	.	.	.	.	.	.	.	.	V	V	P	G	Q	A	G	Q	K	Q	I	L	L	D	A	I	D	K	I	A	D	D
Template Known Secondary structure							T	T												.	.	.	.	.	.	.	.	S	S				T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.									.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions