Return to main results Retrieve Phyre Job Id

Job DescriptionP42597
Confidence57.20%DateThu Jan 5 12:01:42 GMT 2012
Rank40Aligned Residues74
% Identity16%Templatec3qnfA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:endoplasmic reticulum aminopeptidase 1; PDBTitle: crystal structure of the open state of human endoplasmic reticulum2 aminopeptidase 1 erap1
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.........70.........80.... .....90.........100.........110. ........120.......
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Query Sequence  QFLRNAPPINKVMYDNKIHVLKNALGLH. TAVSRVQGGKLKAKVEIRVATVFRNAP. . . . . . . . EPFLRMIVVHELAHLK
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Template Sequence  DYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQW
Template Known Secondary structure  TS

SSSTT

SS

TTGGGT


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   280.........290.........300.........310.........320.........330.........340.........350.........
 
   128.130
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Query Sequence  EKE
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Template Sequence  FGN
Template Known Secondary structure  BTT
Template Predicted Secondary structure 

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   360..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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