Return to main results Retrieve Phyre Job Id

Job DescriptionP42597
Confidence94.76%DateThu Jan 5 12:01:42 GMT 2012
Rank1Aligned Residues38
% Identity16%Templatec3cqbB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:probable protease htpx homolog; PDBTitle: crystal structure of heat shock protein htpx domain from vibrio2 parahaemolyticus rimd 2210633
Resolution1.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110 .........120.........130
Predicted Secondary structure 








.



Query SS confidence 

















.



















Query Sequence  GKLKAKVEIRVATVFRNA. PEPFLRMIVVHELAHLKEKE
Query Conservation 


  
  
  
  
   .
     


 


 

    
Alig confidence 

















.



















Template Conservation 
       
 
   

  
   

 









   
Template Sequence  GAKRDDSLVAVSTGLLHNXTRDEAEAVLAHEVSHIANGD
Template Known Secondary structure 

TTS

S
TT
Template Predicted Secondary structure 












Template SS confidence 






































   57..60.........70.........80.........90.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions