Job Description P40191 Confidence 99.65% Date Thu Jan 5 12:01:12 GMT 2012 Rank 48 Aligned Residues 234 % Identity 21% Template d2fv7a1 SCOP info Ribokinase-like Ribokinase-like Ribokinase-like Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.									.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query Sequence		A	L	Q	A	D	I	V	A	V	Q	S	Q	V	V	Y	G	S	V	G	N	S	I	A	V	P	A	I	K	Q	N	G	L	N	V	F	A	V	.	.	.	.	.	.	P	T	V	L	L	S	N	T	P	H	Y	D	T	F	Y	G	G	.	.	.	.	.	.	.	.	A	I	P	D	E	W	F	S	G	Y	L	R
Query Conservation																																							.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																		.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		G	A	M	T	S	M	V	C	K	V	G	K	D	S	F	G	.	.	.	.	N	D	Y	I	E	N	L	K	Q	N	D	I	S	T	E	F	T	Y	Q	T	K	D	A	A	T	G	T	A	S	I	I	V	N	N	E	G	Q	N	I	I	V	I	V	A	G	A	N	L	L	L	N	T	E	D	L	R	A	A	A	N
Template Known Secondary structure		T											S	S				.	.	.	.									T	T	T				T	T					S	S	S											T	T	S									G	G	G	G	G									T
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	Q	E	R	D	A	L	R	Q	L	R	A	V	T	T	G	Y	M	G	T	A	S	Q	I	K	I	L	A	E	W	L	T	A	L	R	K	D	H	P	D	L	L	I	M	V	D	P	V	I	G	D	I	D	S	G	I	Y	V	K	P	D	L	P	E	A	Y	R	Q	Y	L	L	P	L	A	Q	G	I	T	P
Query Conservation
Alig confidence						.	.	.	.	.	.																										.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.																										.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	S	R	.	.	.	.	.	.	A	K	V	M	V	C	Q	L	E	I	T	P	A	T	S	L	E	A	L	T	M	A	R	R	S	.	.	.	.	.	G	V	K	T	L	F	N	P	A	P	A	I	A	D	L	D	P	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	Y	T	L	S	D	V	F	C	C
Template Known Secondary structure						.	.	.	.	.	.		S						S	S	S															T	.	.	.	.	.	T									S			T	T			T	.	.	.	.	.	.	.	.	.	.	.	.					T		S
Template Predicted Secondary structure						.	.	.	.	.	.																										.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.							.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.													.	.	190	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		N	I	F	E	L	E	I	L	T	G	K	N	C	R	D	L	D	S	A	I	A	A	A	K	S	L	L	S	D	T	L	K	W	V	V	V	T	S	A	S	G	N	E	E	N	Q	E	M	Q	V	V	V	V	T	A	D	S	V	N	V	I	S	H	S	R	V	K	T	.	D	L	K	G	T	G	D	L	F	C	A
Query Conservation																																																																						.
Alig confidence																																									.	.	.	.	.																									.
Template Conservation																																									.	.	.	.	.
Template Sequence		N	E	S	E	A	E	I	L	T	G	L	T	V	G	S	A	A	D	A	G	E	A	A	L	V	L	L	K	R	G	C	Q	V	V	I	I	T	L	G	.	.	.	.	.	A	E	G	C	V	V	L	S	Q	T	E	P	E	P	K	H	I	P	T	E	K	V	K	A	V	D	T	T	G	A	G	D	S	F	V	G
Template Known Secondary structure											S	S				S													T	T	T		S							G	.	.	.	.	.	G	G							S	S			S												S			T	T
Template Predicted Secondary structure																																									.	.	.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.						.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		238	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		Q	L	I	S	G	L	.	.	L	K	G	K	A	L	T	D	A	V	H	R	A	G	L	R	V	L	E	V	M	R	Y	T	Q	Q	H	E	S	D	E	L	I	L	P	P	L	A	E
Query Conservation								.	.
Alig confidence								.	.																															.	.	.	.
Template Conservation																																								.	.	.	.
Template Sequence		A	L	A	F	Y	L	A	Y	Y	P	N	L	S	L	E	D	M	L	N	R	S	N	F	I	A	A	V	S	V	Q	A	A	G	T	Q	S	S	Y	.	.	.	.	P	Y	K	K	D
Template Known Secondary structure											T	T	S																		T	S	S	S	G	G	G	G		.	.	.	.			G	G	G
Template Predicted Secondary structure																																								.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.					.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions