Job Description P40191 Confidence 99.62% Date Thu Jan 5 12:01:12 GMT 2012 Rank 49 Aligned Residues 242 % Identity 14% Template d2dcna1 SCOP info Ribokinase-like Ribokinase-like Ribokinase-like Resolution 2.25

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.											.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	Q	A	D	I	V	A	V	Q	S	Q	V	V	Y	G	S	V	G	N	S	I	A	V	P	A	I	K	Q	N	G	L	N	V	F	A	V	P	T	.	.	.	.	.	.	.	.	.	.	V	L	L	S	N	T	P	H	Y	D	T	F	Y	G	G	A	I	P	D	E	W	F	S	G	Y	L	R	A	L	Q	E
Query Conservation																																									.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		G	N	E	C	G	I	I	A	K	V	G	D	D	E	F	G	.	.	.	.	Y	N	A	I	E	W	L	R	G	Q	G	V	D	V	S	H	M	K	I	D	P	S	A	P	T	G	I	F	F	I	Q	R	H	Y	P	V	P	L	K	S	E	S	I	Y	Y	R	K	G	S	A	G	S	K	L	S	P	E	D	V	D
Template Known Secondary structure		T											S	S				.	.	.	.										T	T		B		T	T					T	T	S										S		S	S	T	T									T	T		T	G	G	G			G	G	G
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		R	D	A	L	R	Q	L	R	A	V	T	T	G	.	.	.	Y	M	G	T	A	S	Q	I	K	I	L	A	E	W	L	T	A	L	R	K	D	H	P	D	L	L	I	M	V	D	P	V	I	G	D	I	D	S	G	I	Y	V	K	P	D	L	P	E	A	Y	R	Q	Y	L	L	P	L	A	Q	G	I	T	P	N
Query Conservation															.	.	.
Alig confidence															.	.	.																						.	.													.	.	.	.	.	.
Template Conservation																																							.	.													.	.	.	.	.	.
Template Sequence		E	E	Y	V	K	S	A	D	L	V	H	S	S	G	I	T	L	A	I	S	S	T	A	K	E	A	V	Y	K	A	F	E	I	A	S	N	R	.	.	S	F	D	T	N	I	R	L	K	L	W	S	.	.	.	.	.	.	A	E	E	A	K	R	E	I	L	K	L	L	S	K	F	H	L	K	F	L	I	T	D
Template Known Secondary structure						T	T		S											S																S	S		.	.								T	T	T	S		.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.													.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.							.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	E	L	E	I	L	T	G	K	N	C	R	D	L	D	S	A	I	A	A	A	K	S	L	L	S	D	T	L	K	W	V	V	V	T	S	A	S	G	N	E	E	N	Q	E	M	Q	V	V	V	V	T	A	D	S	V	N	V	I	S	H	S	R	V	K	T	D	L	K	G	T	G	D	L	F	C	A	Q	L
Query Conservation
Alig confidence													.	.	.	.	.	.																							.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.																							.	.	.	.	.	.
Template Sequence		T	D	D	S	K	I	I	L	G	E	S	.	.	.	.	.	.	D	P	D	K	A	A	K	A	F	S	D	Y	A	E	I	I	V	M	K	L	G	P	.	.	.	.	.	.	K	G	A	I	V	Y	Y	D	G	K	K	Y	Y	S	S	G	Y	Q	V	P	V	E	D	V	T	G	A	G	D	A	L	G	G	T	F
Template Known Secondary structure										S			.	.	.	.	.	.										T	T	T										T	.	.	.	.	.	.	T							T	T													S			T	T
Template Predicted Secondary structure													.	.	.	.	.	.																							.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.							.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.							.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	G	L	L	K	G	K	A	L	T	D	A	V	H	R	A	G	L	R	V	L	E	V	M	R	Y	T	Q	Q	H	E	S	D	E	L	I	L	P	P	L	A	E
Query Conservation
Alig confidence																													.	.	.						.
Template Conservation																													.	.	.						.
Template Sequence		L	S	L	Y	Y	K	G	F	E	M	E	K	A	L	D	Y	A	I	V	A	S	T	L	N	V	M	I	.	.	.	R	G	D	Q	E	.	N	L	P	T	T	K	D
Template Known Secondary structure						T	T	T																		T	T	S	.	.	.	S	S	S	S	T	.	T
Template Predicted Secondary structure																													.	.	.						.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.				290	.	.	.	.		.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions