Job Description P40191 Confidence 99.67% Date Thu Jan 5 12:01:12 GMT 2012 Rank 44 Aligned Residues 234 % Identity 14% Template d2absa1 SCOP info Ribokinase-like Ribokinase-like Ribokinase-like Resolution 1.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.								50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.
Query Sequence		R	A	L	Q	A	D	I	V	A	V	Q	S	Q	V	V	Y	G	S	V	G	N	S	I	A	V	P	A	I	K	Q	N	G	L	N	V	F	A	V	.	.	.	.	.	.	.	P	T	V	L	L	S	N	T	P	H	Y	D	T	F	Y	G	G	A	I	P	D	E	W	F	S	G	Y	L	R	A	L	Q	E	R	D
Query Conservation																																								.	.	.	.	.	.	.
Alig confidence																			.	.	.	.																		.	.	.	.	.	.	.																																		.	.
Template Conservation																			.	.	.	.																																																										.	.
Template Sequence		K	P	G	S	A	G	Y	M	G	A	I	G	D	D	P	R	G	.	.	.	.	Q	V	L	K	E	L	C	D	K	E	G	L	A	T	R	F	M	V	A	P	G	Q	S	T	G	V	C	A	V	L	I	N	E	K	E	R	T	L	C	T	H	L	G	A	C	G	S	F	R	L	P	E	D	W	T	T	F	.	.
Template Known Secondary structure		S	T	T	S									S	S				.	.	.	.											T									T	T												T	T									G	G	G	G	G					T	T					.	.
Template Predicted Secondary structure																			.	.	.	.																																																										.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	R	Q	L	R	A	V	T	T	G	Y	M	G	T	A	S	Q	I	K	I	L	A	E	W	L	T	A	L	R	K	D	H	P	D	L	L	I	M	V	D	P	V	I	G	D	I	D	S	G	I	Y	V	K	P	D	L	P	E	A	Y	R	Q	Y	L	L	P	L	A	Q	G	I	T	P	N	I	F	E	L	E
Query Conservation
Alig confidence		.																																.															.	.	.	.	.	.	.
Template Conservation		.																																.															.	.	.	.	.	.	.
Template Sequence		.	A	S	G	A	L	I	F	Y	A	T	A	Y	T	L	T	A	T	P	K	N	A	L	E	V	A	G	Y	A	H	G	I	.	P	N	A	I	F	T	L	N	L	S	A	P	F	C	.	.	.	.	.	.	.	V	E	L	Y	K	D	A	M	Q	S	L	L	L	H	T	N	I	L	F	G	N	E	E	E	F	A
Template Known Secondary structure		.	T	T	T								G	G	G	G	T	T														T	S	.	T	T													.	.	.	.	.	.	.														T		S
Template Predicted Secondary structure		.																																.															.	.	.	.	.	.	.
Template SS confidence
			158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.								.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.										.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.									.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.
Query Sequence		I	L	T	G	K	N	C	R	D	.	.	.	.	.	.	.	.	.	L	D	S	A	I	A	A	A	K	S	L	L	S	D	T	L	K	W	V	V	V	T	S	A	S	G	N	E	E	N	Q	E	M	Q	V	V	V	V	T	A	D	S	V	N	V	I	S	H	S	R	.	.	.	.	.	.	.	.	V	K	T	D
Query Conservation											.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.
Template Sequence		H	L	A	K	V	H	N	L	V	N	K	E	H	A	V	E	V	C	T	G	A	L	R	L	L	T	A	G	Q	N	T	S	A	T	K	L	V	V	M	T	R	G	H	.	.	.	.	.	.	N	P	V	I	A	A	E	Q	T	A	D	G	T	V	V	V	H	E	V	G	V	P	V	V	A	A	E	K	I	V	D
Template Known Secondary structure								T																				T	T				S	S									T	T	.	.	.	.	.	.	S									T	T	S														G	G	G
Template Predicted Secondary structure																																													.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.							.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	G	T	G	D	L	F	C	A	Q	L	I	S	G	L	L	K	G	K	A	L	T	D	A	V	H	R	A	G	L	R	V	L	E	V	M	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	N	G	A	G	D	A	F	V	G	G	F	L	Y	A	L	S	Q	G	K	T	V	K	Q	C	I	M	C	G	N	A	C	A	Q	D	V	I	Q	H
Template Known Secondary structure			T	T															T	T																			T	S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions