Job Description P40191 Confidence 99.80% Date Thu Jan 5 12:01:12 GMT 2012 Rank 21 Aligned Residues 232 % Identity 21% Template d1rkda_ SCOP info Ribokinase-like Ribokinase-like Ribokinase-like Resolution 1.84

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.										50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.						.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query Sequence		A	L	Q	A	D	I	V	A	V	Q	S	Q	V	V	Y	G	S	V	G	N	S	I	A	V	P	A	I	K	Q	N	G	L	N	V	F	A	V	.	.	.	.	.	.	.	.	.	P	T	V	L	L	S	N	T	P	H	Y	D	T	F	Y	G	G	.	.	.	.	.	A	I	P	D	E	W	F	S	G	Y	L	R
Query Conservation																																							.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Alig confidence																		.	.	.	.																		.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		G	A	N	I	A	F	I	A	C	T	G	D	D	S	I	G	.	.	.	.	E	S	V	R	Q	Q	L	A	T	D	N	I	D	I	T	P	V	S	V	I	K	G	E	S	T	G	V	A	L	I	F	V	N	G	E	G	E	N	V	I	G	I	H	A	G	A	N	A	A	L	S	P	A	L	V	E	A	Q	R	E
Template Known Secondary structure		T											S	S	T	T		.	.	.	.									T	T	T				T	T					T	T												T	T	S									G	G	G	G	G								T	T
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	Q	E	R	D	A	L	R	Q	L	R	A	V	T	T	G	Y	M	G	T	A	S	Q	I	K	I	L	A	E	W	L	T	A	L	R	K	D	H	P	D	L	L	I	M	V	D	P	V	I	G	D	I	D	S	G	I	Y	V	K	P	D	L	P	E	A	Y	R	Q	Y	L	L	P	L	A	Q	G	I	T	P
Query Conservation
Alig confidence						.	.	.	.	.	.																										.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.																										.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	A	N	.	.	.	.	.	.	A	S	A	L	L	M	Q	L	E	S	P	L	E	S	V	M	A	A	A	K	I	A	H	Q	N	.	.	.	.	.	K	T	I	V	A	L	N	P	A	P	A	R	E	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	L	L	A	L	V	D	I	I	T	P
Template Known Secondary structure						.	.	.	.	.	.		S						S	S	S															T	.	.	.	.	.	T									S						.	.	.	.	.	.	.	.	.	.	.	.	.					T	T		S
Template Predicted Secondary structure						.	.	.	.	.	.																										.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		131	.	.	.							.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.	170	.	.	.	.														.	.	.	.	.	180	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	F	E	L	E	I	L	T	G	K	N	C	R	D	L	D	S	A	I	A	A	A	K	S	L	L	S	D	T	L	K	W	V	V	V	T	S	A	S	G	N	E	E	N	Q	E	M	Q	V	V	V	V	T	A	D	S	V	N	V	I	S	H	S	R	V	K	T	D	L	K	G	T	G	D	L	F	C	A	Q
Query Conservation
Alig confidence																																										.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.
Template Sequence		N	E	T	E	A	E	K	L	T	G	I	R	V	E	N	D	E	D	A	A	K	A	A	Q	V	L	H	E	K	G	I	R	T	V	L	I	T	L	G	S	.	.	.	.	.	.	R	G	V	W	A	S	V	N	G	E	G	Q	R	V	P	G	F	R	V	Q	A	V	D	T	I	A	A	G	D	T	F	N	G	A
Template Known Secondary structure											S				S	S														T	T		S							G	G	.	.	.	.	.	.	G							T	T													S			T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.							.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	S	G	L	L	K	G	K	A	L	T	D	A	V	H	R	A	G	L	R	V	L	E	V	M	R	Y	T	Q	Q	H	E	S	D	E	L	I	L	P	P	L	A	E
Query Conservation
Alig confidence																													.	.	.	.
Template Conservation																													.	.	.	.
Template Sequence		L	I	T	A	L	L	E	E	K	P	L	P	E	A	I	R	F	A	H	A	A	A	A	I	A	V	T	.	.	.	.	R	K	G	A	Q	P	S	V	P	W	R	E	E
Template Known Secondary structure								T	T																			T	.	.	.	.	S	S	S	S	G	G	G
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions