Job Description P40191 Confidence 99.75% Date Thu Jan 5 12:01:12 GMT 2012 Rank 29 Aligned Residues 229 % Identity 12% Template d1bx4a_ SCOP info Ribokinase-like Ribokinase-like Ribokinase-like Resolution 1.50

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.											.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	Q	A	D	I	V	A	V	Q	S	Q	V	V	Y	G	S	V	G	N	S	I	A	V	P	A	I	K	Q	N	G	L	N	V	F	A	V	.	.	.	.	.	P	T	V	L	L	S	N	T	P	H	Y	D	T	F	Y	G	G	.	.	.	.	.	.	.	.	.	.	A	I	P	D	E	W	F	S	G	Y	L
Query Conservation																																							.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																		.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		H	K	A	A	T	F	F	G	C	I	G	I	D	K	F	G	.	.	.	.	E	I	L	K	R	K	A	A	E	A	H	V	D	A	H	Y	Y	E	Q	N	E	Q	P	T	G	T	C	A	A	C	I	T	G	D	N	R	S	L	I	A	N	L	A	A	A	N	C	Y	K	K	E	K	H	L	D	L	E	K	N	W
Template Known Secondary structure		T	T										S	S				.	.	.	.										T	T									S	S	S											T	T									G	G	G	G	G			G	G	G	T	T	T	S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	L	Q	E	R	D	A	L	R	Q	L	R	A	V	T	T	G	Y	M	G	T	A	S	Q	I	K	I	L	A	E	W	L	T	A	L	R	K	D	H	P	D	L	L	I	M	V	D	P	V	I	G	D	I	D	S	G	I	Y	V	K	P	D	L	P	E	A	Y	R	Q	Y	L	L	P	L	A	Q	G	I	T
Query Conservation
Alig confidence							.	.	.	.	.	.																													.	.									.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.																													.	.									.	.	.	.	.	.	.
Template Sequence		M	L	V	E	K	.	.	.	.	.	.	A	R	V	C	Y	I	A	G	F	F	L	T	V	S	P	E	S	V	L	K	V	A	H	H	A	S	E	N	.	.	N	R	I	F	T	L	N	L	.	.	.	.	.	.	.	S	A	P	F	I	S	Q	F	Y	K	E	S	L	M	K	V	M	P	Y	V	D	I	L	F
Template Known Secondary structure							.	.	.	.	.	.		S						G	G	G	G	G	T															T	.	.	T								.	.	.	.	.	.	.		S							T								G	G	G		S
Template Predicted Secondary structure							.	.	.	.	.	.																													.	.									.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.							.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.								.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.							.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.				.	.	.
Predicted Secondary structure																												.	.	.	.	.	.																																											.	.	.
Query SS confidence																												.	.	.	.	.	.																																											.	.	.
Query Sequence		P	N	I	F	E	L	E	I	L	T	G	K	N	C	R	D	L	D	S	A	I	A	A	A	K	S	.	.	.	.	.	.	L	L	S	D	T	L	K	W	V	V	V	T	S	A	S	G	N	E	E	N	Q	E	M	Q	V	V	V	V	T	A	D	S	V	N	V	I	S	H	S	R	V	K	.	.	.	T	D	L
Query Conservation																												.	.	.	.	.	.																																											.	.	.
Alig confidence																												.	.	.	.	.	.																.	.	.	.	.	.																						.	.	.
Template Conservation																																																	.	.	.	.	.	.
Template Sequence		G	N	E	T	E	A	A	T	F	A	R	E	Q	G	F	E	T	K	D	I	K	E	I	A	K	K	T	Q	A	L	P	K	M	N	S	K	R	Q	R	I	V	I	F	T	Q	G	R	.	.	.	.	.	.	D	D	T	I	M	A	T	E	S	E	V	T	A	F	A	V	L	D	Q	D	Q	K	E	I	I	D	T
Template Known Secondary structure														T	T															T	S			S		T	T	S									T	T	.	.	.	.	.	.								S	S													T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.							.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	T	G	D	L	F	C	A	Q	L	I	S	G	L	L	K	G	K	A	L	T	D	A	V	H	R	A	G	L	R	V	L	E	V	M	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	G	A	G	D	A	F	V	G	G	F	L	S	Q	L	V	S	D	K	P	L	T	E	C	I	R	A	G	H	Y	A	A	S	I	I	I	R	R
Template Known Secondary structure																	T	T	T																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions