Job Description P40191 Confidence 99.72% Date Thu Jan 5 12:01:12 GMT 2012 Rank 36 Aligned Residues 241 % Identity 12% Template c3nm3D_ PDB info PDB header:transferase Chain: D: PDB Molecule:thiamine biosynthetic bifunctional enzyme; PDBTitle: the crystal structure of candida glabrata thi6, a bifunctional enzyme2 involved in thiamin biosyhthesis of eukaryotes Resolution 3.10 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																					.	.	.	.	.																								.
Query SS confidence																																																					.	.	.	.	.																								.
Query Sequence		D	K	S	R	A	L	Q	A	D	I	V	A	V	Q	S	Q	V	V	Y	G	S	V	G	N	S	I	A	V	P	A	I	K	Q	N	G	L	N	V	F	A	V	P	T	V	L	L	S	N	T	P	H	.	.	.	.	.	Y	D	T	F	Y	G	G	A	I	P	D	E	W	F	S	G	Y	L	R	A	L	Q	E	.
Query Conservation																																																					.	.	.	.	.																								.
Alig confidence																																																					.	.	.	.	.																								.
Template Conservation
Template Sequence		D	K	T	D	Y	K	F	V	N	I	G	L	S	T	K	N	S	L	T	T	T	D	E	I	Q	S	I	I	S	N	T	L	K	A	R	P	L	V	Q	H	I	T	N	K	V	H	Q	N	F	G	A	N	V	T	L	A	L	G	S	S	P	I	M	S	E	I	Q	S	E	V	N	D	L	A	A	I	P	H	A	T
Template Known Secondary structure		T			B				S	S	S							S																	S																							T	T									T	T	T					T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		R	D	A	L	R	Q	L	R	A	V	T	T	G	Y	M	G	T	A	S	Q	I	K	I	L	A	E	W	L	T	A	L	R	K	D	H	P	D	L	L	I	M	V	D	P	V	I	G	D	I	D	S	G	I	Y	V	K	P	D	L	P	E	A	Y	R	Q	Y	L	L	P	L	A	.	.	Q	G	I	T	P	N	I
Query Conservation																																																																									.	.
Alig confidence			.	.	.	.	.	.	.																								.	.	.	.	.													.	.	.	.	.	.	.	.	.															.	.
Template Conservation			.	.	.	.	.	.	.																								.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template Sequence		L	.	.	.	.	.	.	.	L	L	N	T	G	S	V	A	P	P	E	M	L	K	A	A	I	R	A	Y	N	D	V	.	.	.	.	.	K	R	P	I	V	F	D	P	V	G	A	T	.	.	.	.	.	.	.	.	.	E	T	R	L	L	L	N	N	K	L	L	T	F	G	Q	F	S	C	I	K	G	N	S
Template Known Secondary structure			.	.	.	.	.	.	.				S	S		S	S															T	.	.	.	.	.	T												.	.	.	.	.	.	.	.	.											T	T	S	S			S
Template Predicted Secondary structure			.	.	.	.	.	.	.																								.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template SS confidence
		310								.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.						.	.	.	.	.	.	340	.	.	.	.	.										.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.																													.
Query SS confidence																																								.	.																													.
Query Sequence		F	E	L	E	I	L	T	G	K	N	C	R	D	L	D	S	A	I	A	A	A	K	S	L	L	S	D	T	L	K	W	V	V	V	T	S	A	S	.	.	G	N	E	E	N	Q	E	M	Q	V	V	V	V	T	A	D	S	V	N	V	I	S	H	S	R	V	K	T	.	D	L	K	G	T	G	D	L	F	C	A
Query Conservation																																								.	.																													.
Alig confidence												.	.	.																										.	.																													.
Template Conservation												.	.	.
Template Sequence		S	E	I	L	G	L	A	E	L	S	.	.	.	N	E	L	L	I	Q	A	T	K	I	V	A	F	K	Y	K	T	V	A	V	C	T	G	E	F	D	F	I	A	D	G	T	I	E	G	K	Y	S	L	S	K	G	T	N	G	T	S	V	E	D	I	P	C	V	A	V	E	A	G	P	I	G	C	S	L	G	S
Template Known Secondary structure									T			.	.	.															T	T	S						S	S	S								G	G	G	B			S	S	S		S	S	S			G	G	G	S						B
Template Predicted Secondary structure												.	.	.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380				.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		Q	L	I	S	G	L	L	K	G	K	.	.	.	A	L	T	D	A	V	H	R	A	G	L	R	V	L	E	V	M	R	Y	T	Q	Q	H	E	S	D
Query Conservation												.	.	.
Alig confidence												.	.	.
Template Conservation
Template Sequence		T	I	A	C	M	I	G	G	Q	P	S	E	G	N	L	F	H	A	V	V	A	G	V	M	L	Y	K	A	A	G	K	I	A	S	E	K	C	N	G
Template Known Secondary structure												T	T																										S	S
Template Predicted Secondary structure
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions