Job Description P40191 Confidence 99.69% Date Thu Jan 5 12:01:12 GMT 2012 Rank 40 Aligned Residues 171 % Identity 16% Template c3lhxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ketodeoxygluconokinase; PDBTitle: crystal structure of a ketodeoxygluconokinase (kdgk) from2 shigella flexneri Resolution 1.87 Å

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		88	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		Q	L	R	A	V	T	T	G	.	.	.	.	Y	M	G	T	A	S	Q	I	K	I	L	A	E	W	L	T	A	L	R	K	D	H	P	D	L	L	I	M	V	D	P	V	I	G	D	I	D	S	G	I	Y	V	K	P	D	L	P	E	A	Y	R	Q	Y	L	L	P	L	A	Q	G	I	T	P	N	I	F	E	L
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.																						.	.													.	.	.
Template Conservation																																			.	.													.	.	.
Template Sequence		N	F	D	Y	L	Y	L	S	G	I	S	L	A	I	L	S	P	T	S	R	E	K	L	L	S	L	L	R	E	C	R	A	K	.	.	G	G	K	V	I	F	D	N	N	Y	R	P	.	.	.	R	L	W	A	S	K	E	E	T	Q	Q	V	Y	Q	Q	X	L	E	C	T	D	I	A	F	L	T	L	D	D	E
Template Known Secondary structure		T		S											T	S																		T	.	.	T											G	.	.	.	G	G	S	S														T	T		S
Template Predicted Secondary structure																																			.	.													.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.				.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220					.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		E	I	L	T	G	K	N	C	R	D	L	D	S	A	I	A	A	A	K	S	L	L	S	D	T	L	K	W	V	V	V	T	S	A	S	G	N	E	E	N	Q	E	M	Q	V	V	V	V	T	A	D	S	V	N	V	I	S	.	.	.	.	H	S	R	V	K	T	D	L	K	G	T	G	D	L	F	C	A	Q	L
Query Conservation																																																											.	.	.	.
Alig confidence									.	.	.	.	.																								.	.	.	.	.	.																	.	.	.	.
Template Conservation									.	.	.	.	.																								.	.	.	.	.	.
Template Sequence		D	A	L	W	G	Q	Q	.	.	.	.	.	P	V	E	D	V	I	A	R	T	H	N	A	G	V	K	E	V	V	V	K	R	G	A	.	.	.	.	.	.	D	S	C	L	V	S	I	A	G	E	A	L	V	D	V	P	A	V	K	L	P	K	E	K	V	I	D	T	T	A	A	G	D	S	F	S	A	G	Y
Template Known Secondary structure									.	.	.	.	.												T	T		S							T	T	.	.	.	.	.	.								T	T	S												G	G	G					T	T
Template Predicted Secondary structure									.	.	.	.	.																								.	.	.	.	.	.
Template SS confidence
		275	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.							.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	G	L	L	K	G	K	A	L	T	D	A	V	H	R	A	G	L	R	V	L	E	V	M	R	Y	T	Q	Q	H	E	S	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	V	R	L	T	G	G	S	A	E	N	A	A	K	R	G	H	L	T	A	S	T	V	I	Q	Y	R	G	A	I	I	P	R	E
Template Known Secondary structure						T	T	T																		T	T	S	S	S	S	S			G	G
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions