Job Description P40191 Confidence 99.71% Date Thu Jan 5 12:01:12 GMT 2012 Rank 39 Aligned Residues 215 % Identity 16% Template c3julA_ PDB info PDB header:transferase Chain: A: PDB Molecule:lin2199 protein; PDBTitle: crystal structure of listeria innocua d-tagatose-6-phosphate2 kinase bound with substrate Resolution 2.40 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.										50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		A	L	Q	A	D	I	V	A	V	Q	S	Q	V	V	Y	G	S	V	G	N	S	I	A	V	P	A	I	K	Q	N	G	L	N	V	F	A	V	.	.	.	.	.	.	.	.	.	P	T	V	L	L	S	N	T	P	H	Y	D	T	F	Y	G	G	A	.	.	.	I	P	D	E	W	F	S	G	Y	L	R	A	L
Query Conservation																																							.	.	.	.	.	.	.	.	.																			.	.	.
Alig confidence															.			.	.	.	.																		.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation															.			.	.	.	.
Template Sequence		G	I	K	N	E	A	L	G	I	A	G	S	D	.	N	L	.	.	.	.	D	K	L	Y	A	I	L	K	E	K	H	I	N	H	D	F	L	V	E	A	G	T	S	T	R	E	C	F	V	V	L	S	D	D	T	N	G	S	T	X	I	P	E	A	G	F	T	V	S	Q	T	N	K	D	N	L	L	K	Q	I
Template Known Secondary structure		T											S	T	.	T		.	.	.	.										T	T			B						T	T												T	T		S
Template Predicted Secondary structure															.			.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.		.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	R	D	A	L	R	Q	L	R	A	V	T	T	G	Y	M	G	T	A	S	Q	I	K	I	L	A	E	W	L	T	A	L	R	K	D	H	P	D	L	L	I	M	V	D	P	V	I	G	D	I	D	S	G	I	Y	V	K	P	D	L	P	E	A	Y	R	Q	Y	L	L	P	L	A	Q	G	I	T	P	N	I
Query Conservation
Alig confidence											.																											.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																											.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	K	V	K	K	E	D	X	.	V	V	I	A	G	S	P	P	P	H	Y	T	L	S	D	F	K	E	L	L	R	T	V	K	A	T	.	.	G	A	F	L	G	C	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	G	E	Y	L	N	L	A	V	E	X	G	V	D	F	I	K	P	N	E
Template Known Secondary structure							T	T	S		.					S				T	T															T	T	.	.	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.													T		S					B
Template Predicted Secondary structure											.																											.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.															.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	L	E	I	L	T	G	K	N	C	R	D	L	D	S	A	I	A	A	A	K	S	L	L	S	D	T	L	K	W	V	V	V	T	S	A	S	G	N	E	E	N	Q	E	M	Q	V	V	V	V	T	A	D	S	V	N	V	I	S	H	S	R	V	K	T	D	L	K	G	T	G	D	L	F	C	A	Q	L	I
Query Conservation
Alig confidence																					.	.	.	.																.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation																					.	.	.	.																.	.	.	.	.	.														.	.	.	.	.	.	.
Template Sequence		D	E	V	I	A	I	L	D	E	K	T	N	S	L	E	E	N	I	R	.	.	.	.	T	L	A	E	K	I	P	Y	L	V	V	S	L	G	A	.	.	.	.	.	.	K	G	S	I	C	A	H	N	G	K	L	Y	Q	.	.	.	.	.	.	.	V	I	P	P	T	G	A	G	D	V	F	V	G	A	F	I
Template Known Secondary structure									T			S	S								.	.	.	.				T	T		S							G	G	.	.	.	.	.	.	G							T	T					.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.																.	.	.	.	.	.														.	.	.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.							.	.	.	.	.	.	.	230	.	.	.	.	.								.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	L	L	K	G	K	A	L	T	D	A	V	H	R	A	G	L	R	V	L	E	V	M	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	L	A	X	N	X	P	I	T	E	T	L	K	V	A	T	G	C	S	A	S	K	V	X	Q
Template Known Secondary structure						T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions