Job Description P40191 Confidence 99.56% Date Thu Jan 5 12:01:12 GMT 2012 Rank 57 Aligned Residues 206 % Identity 17% Template c3i3yB_ PDB info PDB header:transferase Chain: B: PDB Molecule:carbohydrate kinase; PDBTitle: crystal structure of ribokinase in complex with d-ribose from2 klebsiella pneumoniae Resolution 2.15 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.																																	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	V	G	N	S	I	A	V	P	A	I	K	Q	N	G	L	N	V	F	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	V	L	L	S	N	T	P	H	Y	D	T	F	Y	G	G	A	I	P	D	E	W	F	S	G
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		G	G	K	G	A	N	Q	A	.	I	I	L	S	R	C	G	I	E	T	R	L	I	A	A	T	G	N	D	S	N	G	A	W	I	R	Q	Q	I	K	N	E	P	L	X	L	L	P	D	G	H	F	N	Q	H	S	D	T	S	I	I	L	A	D	G	N	A	I	I	T	T	T	A	A	A	D	T	F	S	L	D
Template Known Secondary structure										.						T	T											S	S											T	T	S	S					S	S	S			S	S																			T	T	T	T	T
Template Predicted Secondary structure										.
Template SS confidence
		37	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	R	A	L	Q	E	R	D	A	L	R	Q	L	R	A	V	T	T	G	Y	M	G	T	A	S	Q	I	K	I	L	A	E	W	L	T	A	L	R	K	D	H	P	D	L	L	I	M	V	D	P	V	I	G	D	I	D	S	G	I	Y	V	K	P	D	L	P	E	A	Y	R	Q	Y	L	L	P	L	A	Q	G
Query Conservation
Alig confidence										.	.																													.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.																													.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	X	I	P	H	X	A	D	.	.	A	V	A	G	D	I	L	L	Q	Q	G	N	F	S	L	D	K	T	R	A	L	F	Q	Y	A	R	S	R	.	.	.	.	.	G	X	T	T	V	F	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	V	N	P	D	F	C	H	L	W	P	L	I	D	I
Template Known Secondary structure				G	G	G	G	T	T	.	.			T	T							S		S															T	.	.	.	.	.	T								.	.	.	.	.	.	.	.	.	.	.	.	.		S			G	G	G	G	G		G	G	G		S
Template Predicted Secondary structure										.	.																													.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.						.	.	.	.	.	160	.	.														.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	P	N	I	F	E	L	E	I	L	T	G	K	N	C	R	D	L	D	S	A	I	A	A	A	K	S	L	L	S	D	T	L	K	W	V	V	V	T	S	A	S	G	N	E	E	N	Q	E	M	Q	V	V	V	V	T	A	D	S	V	N	V	I	S	H	S	R	V	K	T	D	L	K	G	T	G	D	L	F
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Sequence		A	V	V	N	E	S	E	A	E	L	L	Q	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	K	T	L	V	I	T	Q	G	A	.	.	.	.	.	.	A	G	A	W	L	V	Q	E	G	Q	R	Q	F	C	P	A	V	P	A	E	A	L	D	T	T	G	A	G	D	T	F
Template Known Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S							T	T	.	.	.	.	.	.	S						S	S	S													S			T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.																			.	.	.	.	.	.	.	200	.	.	.							.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		C	A	Q	L	I	S	G	L	L	K	G	.	.	K	A	L	T	D	A	V	H	R	A	G	L	R	V	L	E	V	M	R	Y	T	Q	Q	H	E	S	D	E	L	I	L	P	P	L	A	E
Query Conservation													.	.
Alig confidence													.	.																												.	.	.	.
Template Conservation																																										.	.	.	.
Template Sequence		L	A	V	X	L	A	S	A	L	L	R	G	V	A	P	D	A	L	A	L	A	H	A	S	R	A	A	A	I	T	V	S	R	R	G	T	L	S	A	F	.	.	.	.	P	G	S	R	E
Template Known Secondary structure												T	T	S		S																T	T	S		S	S	G	G	G	S	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.					.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions