Job Description P40191 Confidence 99.46% Date Thu Jan 5 12:01:12 GMT 2012 Rank 61 Aligned Residues 227 % Identity 14% Template c3gbuD_ PDB info PDB header:transferase Chain: D: PDB Molecule:uncharacterized sugar kinase ph1459; PDBTitle: crystal structure of an uncharacterized sugar kinase ph1459 from2 pyrococcus horikoshii in complex with atp Resolution 2.20 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.								50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.
Query Sequence		A	L	Q	A	D	I	V	A	V	Q	S	Q	V	V	Y	G	S	V	G	N	S	I	A	V	P	A	I	K	Q	N	G	L	N	V	F	A	V	.	.	.	.	.	.	.	P	T	V	L	L	S	N	T	P	H	Y	D	T	F	Y	G	G	A	I	P	D	E	W	F	S	G	Y	L	R	A	L	Q	E	R	D	A
Query Conservation																																							.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																		.	.	.	.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		G	V	K	S	S	L	I	S	K	V	G	N	D	P	F	G	.	.	.	.	E	Y	L	I	E	E	L	S	K	E	N	V	D	T	R	G	I	V	K	D	E	K	K	H	T	G	I	V	F	V	Q	L	K	G	A	S	P	S	F	L	L	Y	D	D	V	A	Y	F	N	X	T	L	N	D	I	N	W	D	I	V
Template Known Secondary structure		T											S	S				.	.	.	.										T	T		B		T	T					S	S	S											S	S	S								S	S	G	G	G				G	G	G
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	Q	L	R	A	V	T	T	G	Y	M	G	T	A	S	Q	I	K	I	L	A	E	W	L	T	A	L	R	K	D	H	P	D	L	L	I	M	V	D	P	V	I	G	D	I	D	S	G	I	Y	V	K	P	D	L	P	E	A	Y	R	Q	Y	L	L	P	L	A	Q	G	I	T	P	N	I	F	E	L	E	I
Query Conservation
Alig confidence																																	.	.												.	.
Template Conservation																																	.	.												.	.
Template Sequence		E	E	A	K	I	V	N	F	G	S	V	I	L	A	R	N	P	S	R	E	T	V	X	K	V	I	K	K	I	K	G	.	.	S	S	L	I	A	F	D	V	N	L	R	.	.	L	D	L	W	R	G	Q	E	E	E	X	I	K	V	L	E	E	S	I	K	L	A	D	I	V	K	A	S	E	E	E	V	L	Y
Template Known Secondary structure					S						S	G	G	G	G	S	T	T													B	T	.	.	T	B										.	.	G	G	G	G	T	T														T	T		S
Template Predicted Secondary structure																																	.	.												.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	T	G	K	N	C	R	D	L	D	S	A	I	A	A	A	K	S	L	L	S	D	T	L	K	W	V	V	V	T	S	A	S	G	N	E	E	N	Q	E	M	Q	V	V	V	V	T	A	D	S	V	N	V	I	S	H	S	R	V	K	T	D	L	K	G	T	G	D	L	F	C	A	Q	L	I	S	G	L	L	.
Query Conservation																																																																																	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.																																									.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Sequence		L	E	N	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	V	K	G	S	X	L	T	A	I	T	L	G	P	.	.	.	.	.	.	K	G	F	R	L	I	K	N	E	T	V	V	D	V	P	S	Y	N	V	N	P	L	D	T	T	G	A	G	D	A	F	X	A	A	L	L	V	G	I	L	K
Template Known Secondary structure				T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S							G	G	.	.	.	.	.	.	G							T	T													S			T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template SS confidence
		199	200	.	.	.														.	.	.	.	.	.	210	.	.	.	.	.	.	.	.							.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
			245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	K	G	K	A	L	T	D	A	V	H	R	A	G	L	R	V	L	E	V	M	R	Y
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		L	K	G	L	D	L	L	K	L	G	K	F	A	N	L	V	A	A	L	S	T	Q	K
Template Known Secondary structure		S	S	S																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions