Job Description P40191 Confidence 43.67% Date Thu Jan 5 12:01:12 GMT 2012 Rank 74 Aligned Residues 131 % Identity 13% Template c3ezxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:monomethylamine corrinoid protein 1; PDBTitle: structure of methanosarcina barkeri monomethylamine2 corrinoid protein Resolution 2.56 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	S	L	L	L	F	N	D	K	S	R	A	L	Q	A	D	I	V	A	V	Q	S	Q	V	V	Y	G	S	V	G	N	S	I	A	V	P	A	I	K	Q	N	G	L	N	V	F	A	V	P	T	V	L	L	S	N	T	P	H	Y	D	T	F	Y	G	G	A	I	P	D	E	W	F	S	G	Y	L	R	A	L
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	E	V	L	T	P	E	L	E	K	N	K	K	E	A	G	L	A	I	T	F	V	A	E	G	D	I	H	D	I	G	H	R	L	V	T	T	M	L	G	A	N	G	F	Q	I	V	D	L	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	L	N	E	N	V	V	E	E	A	A	K	H
Template Known Secondary structure										T	S	S													T	T																	T	S								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S													T
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																.	.	.	130	.	.	.	.	.	.	.	.	.	140
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																	.																						.	.
Query SS confidence																	.																						.	.
Query Sequence		Q	E	R	D	A	L	R	Q	L	R	A	V	T	T	G	.	Y	M	G	T	A	S	Q	I	K	I	L	A	E	W	L	T	A	L	R	K	D	.	.	H	P	D	L	L	I	M	V	D	P	V	I	G	D	I	D	S	G	I	Y	V	K	P	D	L	P	E	A	Y	R	Q	Y	L	L	P	L	A	Q	G	I	T
Query Conservation																	.																						.	.
Alig confidence		.	.	.	.	.	.	.									.																						.	.									.	.	.	.	.	.	.						.									.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																									.	.	.	.	.	.	.						.									.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	K	G	E	K	V	L	L	V	G	S	A	L	M	T	T	S	M	L	G	Q	K	D	L	M	D	R	L	N	E	E	K	L	R	D	S	V	K	C	M	F	.	.	.	.	.	.	.	G	G	A	P	V	.	S	D	K	W	I	E	E	I	.	.	.	.	.	.	G	A	D	A	T	A
Template Known Secondary structure		.	.	.	.	.	.	.	T	T	S									S	S					T												T	T		G	G	G	S					.	.	.	.	.	.	.		S	S	S		.									.	.	.	.	.	.	T			B
Template Predicted Secondary structure		.	.	.	.	.	.	.																																									.	.	.	.	.	.	.						.									.	.	.	.	.	.
Template SS confidence
									144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.								.	.	.	.	.		.	190	.	.	.	.	.	.							.	.	.	200	.	.
		158	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	I	F	E	L	E	I	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	N	A	A	E	A	A	K	V	A
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions