Job Description P40191 Confidence 99.67% Date Thu Jan 5 12:01:12 GMT 2012 Rank 42 Aligned Residues 228 % Identity 16% Template c2c49A_ PDB info PDB header:transferase Chain: A: PDB Molecule:sugar kinase mj0406; PDBTitle: crystal structure of methanocaldococcus jannaschii2 nucleoside kinase - an archaeal member of the ribokinase3 family Resolution 1.92 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.									50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.
Query Sequence		A	L	Q	A	D	I	V	A	V	Q	S	Q	V	V	Y	G	S	V	G	N	S	I	A	V	P	A	I	K	Q	N	G	L	N	V	F	A	V	.	.	.	.	.	.	.	.	P	T	V	L	L	S	N	T	P	H	Y	D	T	F	Y	G	G	A	I	P	D	E	W	F	S	G	Y	L	R	A	L	Q	E	R	D
Query Conservation																																							.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																		.	.	.	.	.	.	.	.																																		.	.
Template Conservation																		.	.	.	.																																																											.	.
Template Sequence		G	V	N	S	E	L	L	S	C	V	G	Y	D	F	K	N	.	.	.	.	S	G	Y	E	R	Y	L	K	N	L	D	I	N	I	S	K	L	Y	Y	S	E	E	E	E	T	P	K	A	W	I	F	T	D	K	D	N	N	Q	I	T	F	F	L	W	G	A	A	K	H	Y	K	E	L	N	P	P	N	F	.	.
Template Known Secondary structure		T											T	T	T	T	T	.	.	.	.	S									T	T		B		T	T					S	S	S											T	T										G	G	G	G	G	G	G	G							.	.
Template Predicted Secondary structure																		.	.	.	.																																																											.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	R	Q	L	R	A	V	T	T	G	Y	M	G	T	A	S	Q	I	K	I	L	A	E	W	L	T	A	L	R	K	D	H	P	D	L	L	I	M	V	D	P	V	I	G	D	I	D	S	G	I	Y	V	K	P	D	L	P	E	A	Y	R	Q	Y	L	L	P	L	A	Q	G	I	T	P	N	I	F	E	L	E
Query Conservation
Alig confidence		.	.	.												.	.	.	.																	.	.	.										.	.	.	.	.	.	.	.
Template Conservation		.	.	.												.	.	.	.																	.	.	.										.	.	.	.	.	.	.	.
Template Sequence		.	.	.	N	T	E	I	V	H	I	A	T	G	D	.	.	.	.	P	E	F	N	L	K	C	A	K	K	A	Y	G	N	N	L	.	.	.	V	S	F	D	P	G	Q	D	L	.	.	.	.	.	.	.	.	P	Q	Y	S	K	E	M	L	L	E	I	I	E	H	T	N	F	L	F	M	N	K	H	E	F	E
Template Known Secondary structure		.	.	.									S			.	.	.	.												B	T	T	B		.	.	.						G	G	G	G	.	.	.	.	.	.	.	.	G	G											T	T		S
Template Predicted Secondary structure		.	.	.												.	.	.	.																	.	.	.										.	.	.	.	.	.	.	.
Template SS confidence
					130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.									.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		I	L	T	G	K	N	C	R	D	L	D	S	A	I	A	A	A	K	S	L	L	S	D	T	L	K	W	V	V	V	T	S	A	S	G	N	E	E	N	Q	E	M	Q	V	V	V	V	T	A	D	S	V	N	V	I	S	H	S	R	V	K	T	.	D	L	K	G	T	G	D	L	F	C	A	Q	L	I	S	G	L
Query Conservation																																																																.
Alig confidence																.	.	.	.	.	.	.	.													.	.	.	.	.	.																							.
Template Conservation																.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Sequence		R	A	S	N	L	L	N	F	E	I	D	D	Y	L	.	.	.	.	.	.	.	.	E	R	V	D	A	L	I	V	T	K	G	S	.	.	.	.	.	.	K	G	S	V	I	Y	T	K	D	K	K	I	E	I	P	C	I	K	A	G	K	V	I	D	P	T	G	A	G	D	S	Y	R	A	G	F	L	S	A	Y
Template Known Secondary structure								T								.	.	.	.	.	.	.	.	T	T		S							G	G	.	.	.	.	.	.	G							S	S											S	S					T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.									.	.	.	.	210	.	.	.	.	.	.	.							.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	G	K	A	L	T	D	A	V	H	R	A	G	L	R	V	L	E	V	M	R	Y	T	Q	Q	H	E	S	D	E	L	I	L	P	P	L	A	E
Query Conservation
Alig confidence																																.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		V	K	G	Y	D	L	E	K	C	G	L	I	G	A	A	T	A	S	F	V	V	E	A	K	G	C	Q	T	N	L	.	.	.	.	P	T	W	D	K
Template Known Secondary structure			T	T																		T	T	S	S	S	S	S	T	T		.	.	.	.
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions