 |
Job Description | P11557 | Confidence | 5.27% | Date | Thu Jan 5 11:32:47 GMT 2012 |
Rank | 41 | Aligned Residues | 59 |
% Identity | 12% | Template | d1r89a3 |
SCOP info | Ferredoxin-like
| PAP/Archaeal CCA-adding enzyme, C-terminal domain
| Archaeal tRNA CCA-adding enzyme
|
Resolution | 1.80 |
|
 |
  |   |
357 | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | Y | D | N | L | N | G | W | A | K | K | E | N | L | K | N | Y | V | V | Y | E | T | T | R | N | G | Q | P | W | Y | V | L | V | S | G | V | Y | A | S | K | E | E | A | K | K | A | V | S | T | L | P | A | D | V | Q | A | K | N | P | W | A | K | P | L | R | Q | V | Q | A | D | L | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |
| . | . | . | . |   |   |
|
| . |
|   |   |   |   |   |
|
|
|   |
|
|   |   |
|
|   |   |   |
|   |   | . | . |   |   |   |
|
|
| . | . | . | . | . | . |
|   |
|   |   |
|   |   |
Template Sequence |   |
D | E | R | N | V | K | K | F | L | S | R | N | R | A | F | R | P | F | I | . |
. |
. |
. |
E | N | G | R | . |
W | W | A | F | E | M | R | K | F | T | T | P | E | E | G | V | R | S | Y | A | S | T | . |
. |
H | W | H | T | L | G | . |
. |
. |
. |
. |
. |
K | N | V | G | E | S | I | R |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  | S |
|
| S | S |
|
|  |  | . | . | . | . |  | T | T |  | . |  |  |  |  |  |  |
| S |
| S | S |  |  |  |  |  |  |  |  |  |  |  | . | . |
| G | G | G | S |
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  | . | . | . | . |  |
|
|  | . |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
351 | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | |
|
|
|
370 | . | . | . | |
. | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | |
|
. | . | . | . | 400 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|