Return to main results Retrieve Phyre Job Id

Job DescriptionP11557
Confidence4.99%DateThu Jan 5 11:32:47 GMT 2012
Rank45Aligned Residues58
% Identity14%Templated1fnxh2
SCOP infoFerredoxin-like RNA-binding domain, RBD Canonical RBD
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   348.350.........360......... 370.........380.........390.........400......
Predicted Secondary structure 





.















Query SS confidence 





















.




































Query Sequence  YTLQLSSSSNYDNLNGWAKKEN. LKNYVVYETTRNGQPWYVLVSGVYASKEEAKKAVSTL
Query Conservation 



                  .                 
   
 
 
   
  
   
Alig confidence 





















.




















.














Template Conservation 

 


   
   
   
   
                 
 


. 
     
  

  
Template Sequence  YVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFI. RFDKRIEAEEAIKGL
Template Known Secondary structure 


TT

TTS


SSSS



.S
TT
Template Predicted Secondary structure 





















.

Template SS confidence 



























































   128.130.........140.........150.........160.........170. ........180......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions