Job Description P11557 Confidence 7.90% Date Thu Jan 5 11:32:47 GMT 2012 Rank 25 Aligned Residues 51 % Identity 24% Template c2wbrA_ PDB info PDB header:dna-binding protein Chain: A: PDB Molecule:gw182; PDBTitle: the rrm domain in gw182 proteins contributes to mirna-2 mediated gene silencing Resolution UNK

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		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		S	H	Y	T	L	Q	L	S	S	S	S	N	Y	D	N	L	N	G	W	A	K	K	E	.	N	L	K	N	Y	V	V	Y	E	T	T	R	N	G	Q	P	W	Y	V	L	V	S	G	V	Y	A	S	K	E	E	A	K	K	A	V	S	T	L	P
Query Conservation																									.
Alig confidence												.	.	.	.										.														.	.	.	.	.	.	.
Template Conservation												.	.	.	.																								.	.	.	.	.	.	.
Template Sequence		K	N	L	T	A	Q	I	D	G	P	.	.	.	.	T	L	R	T	L	C	M	Q	H	G	P	L	V	S	F	H	P	Y	L	N	Q	G	I	.	.	.	.	.	.	.	A	L	C	K	Y	T	T	R	E	E	A	N	K	A	Q	M	A	L	N
Template Known Secondary structure						T	T					.	.	.	.										S									T	T	T	T		.	.	.	.	.	.	.						S	S												T
Template Predicted Secondary structure												.	.	.	.																								.	.	.	.	.	.	.
Template SS confidence
		1122	.	.	.	.	.	.	.	1130	.					.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.								.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions