Job Description P11557 Confidence 3.87% Date Thu Jan 5 11:32:47 GMT 2012 Rank 66 Aligned Residues 74 % Identity 16% Template c2do4A_ PDB info PDB header:immune system Chain: A: PDB Molecule:squamous cell carcinoma antigen recognized by t- PDBTitle: solution structure of the rna binding domain of squamous2 cell carcinoma antigen recognized by t cells 3 Resolution UNK

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		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.				.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.													.
Query SS confidence																												.	.	.													.
Query Sequence		A	K	T	A	G	N	V	G	S	L	K	S	A	P	S	S	H	Y	T	L	Q	L	S	S	S	S	.	.	.	N	Y	D	N	L	N	G	W	A	K	K	E	.	N	L	K	N	Y	V	V	Y	E	T	T	R	N	G	Q	P	W	Y	V	L	V	S	G	V	Y	A	S	K	E	E	A	K	K	A	V	S	T	L
Query Conservation																												.	.	.													.
Alig confidence																												.	.	.													.																							.	.
Template Conservation																																																																		.	.
Template Sequence		G	S	S	G	S	S	G	V	F	R	Y	S	T	S	L	E	K	H	K	L	F	I	S	G	L	P	F	S	C	T	K	E	E	L	E	E	I	C	K	A	H	G	T	V	K	D	L	R	L	V	T	N	R	A	G	K	P	K	G	L	A	Y	V	E	.	.	Y	E	N	E	S	Q	A	S	Q	A	V	M	K	M
Template Known Secondary structure							S	S					S	S					S						S			T	T											T	T	T	S											T	T	S										.	.		S	S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		784	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.			.	.	850	.	.	.	.	.	.	.	.	.	860	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions