Job Description P11557 Confidence 7.57% Date Thu Jan 5 11:32:47 GMT 2012 Rank 26 Aligned Residues 61 % Identity 13% Template c2dh9A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m; PDBTitle: solution structure of the c-terminal rna binding domain in2 heterogeneous nuclear ribonucleoprotein m Resolution UNK

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		344	.	.	.	.	.	350	.	.	.	.	.	.				.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		P	S	S	H	Y	T	L	Q	L	S	S	S	S	.	.	.	N	Y	D	N	L	N	G	W	A	K	K	E	N	L	K	N	Y	V	V	Y	E	T	T	R	N	G	Q	P	W	Y	V	L	V	S	G	V	Y	A	S	K	E	E	A	K	K	A	V	S	T	L
Query Conservation															.	.	.
Alig confidence															.	.	.																																		.	.
Template Conservation																																																			.	.
Template Sequence		S	S	G	S	S	G	I	F	V	R	N	L	P	F	D	F	T	W	K	M	L	K	D	K	F	N	E	C	G	H	V	L	Y	A	D	I	K	M	E	N	G	K	S	K	G	C	G	V	V	.	.	K	F	E	S	P	E	V	A	E	R	A	C	R	M	M
Template Known Secondary structure			S									S			T	T												T	T	S											T	T				S					.	.			S	S											T
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.			.	.	.	.	.	.	.	590	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions