Job Description P28915 Confidence 11.15% Date Thu Jan 5 11:45:25 GMT 2012 Rank 17 Aligned Residues 81 % Identity 16% Template c2rf4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna-directed rna polymerase i subunit rpa4; PDBTitle: crystal structure of the rna polymerase i subcomplex a14/43 Resolution 3.10 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		G	V	I	A	D	C	E	I	Q	A	K	D	H	D	C	F	T	I	F	A	K	G	T	I	F	S	A	F	P	V	L	N	N	K	A	M	W	R	W	Y	Q	N	E	D	I	G	E	Y	Y	W	Q	T	E	L	G	T	C	K	N	N	K	F	T	P	S	G	A	R	L	L	I	R	V	G	S	L	R	L	.	N
Query Conservation																																																																																.
Alig confidence																																																										.	.	.	.	.	.	.																.
Template Conservation																																																										.	.	.	.	.	.	.
Template Sequence		G	D	V	L	E	G	Y	I	F	I	Q	S	A	S	H	I	G	L	L	I	H	D	A	F	N	A	S	I	K	K	N	N	I	P	V	D	W	T	F	V	H	N	D	G	N	S	L	G	H	W	V	D	S	N	G	E	.	.	.	.	.	.	.	P	I	D	G	K	L	R	F	T	V	R	N	V	H	T	T	G
Template Known Secondary structure		T												S	S							T	T	T							S	T	T	S		S	S		B					S								B		S	S			.	.	.	.	.	.	.	B			S													S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.								.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		95	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	H	A	I	K	G	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	V	S	V	D	G	T	L
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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